Gene Rpic12D_5382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5382 
Symbol 
ID8007879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp271731 
End bp272222 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content56% 
IMG OID644822589 
Producthypothetical protein 
Protein accessionYP_002973849 
Protein GI241114374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.177051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAT CCTCGCATCG ACATCCCCTG AAAGGGACAG GCATTCGTCT GCATCCGTAT 
CACTATTGGG TTGCTCTCGC CGTATTGCTA GCGGTAGCGG TGTCTGGGCT GATATGGACG
GTTTTGCACG ATTTGCTTCA ATGGGAGGAC GCACCGATCG TCCGCCAGAT TCTGCAGTTG
CATGGCGCCT TTGCGTTCTG CAGCCTGATT CTCTTGGGTT CCATGCTGCC GCAACACATT
CGCTTCGCGT GGGTTGCGCG CCGAAACCTC GTGACCGGTA CGTTGACGGG AATCGTGTTC
TTGTTGCTGA CCATCACCGC TTATGGGCTG TATTACGGGC CCGAAGATTG GAGTGGTCTT
ACGAAGACTG TGCACCTTGT TCTGGGCATT GCTGCTGTTG CGGCCGTGCC CCTCCACATG
TTCATTGGAC GGAAGCGACA CAACGGCTAC CGTGCCCCCG CGAGCAAGAA TGTACGGCAC
GAAAAAACCT GA
 
Protein sequence
MTQSSHRHPL KGTGIRLHPY HYWVALAVLL AVAVSGLIWT VLHDLLQWED APIVRQILQL 
HGAFAFCSLI LLGSMLPQHI RFAWVARRNL VTGTLTGIVF LLLTITAYGL YYGPEDWSGL
TKTVHLVLGI AAVAAVPLHM FIGRKRHNGY RAPASKNVRH EKT