| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5381 |
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| Symbol | |
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| ID | 8007878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 270886 |
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| End bp | 271734 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644822588 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_002973848 |
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| Protein GI | 241114373 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.191484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCGTC GCTCCAAACC GCTATTGGGG ACTTTCGTTG AAGTTCGCAT TGACGATGTG
TATCCCCAGG ACTGCGCTCA CTTGGCAGAA ACCGCCATCG CAGCGGCGTT CTCCGTAATC
GAGCAAGCCG AGGCGTTGAT GAGCTTCCAG CGCTCGGATA GCGACTTGTC ACGTCTGCAT
GCGGCGTCGG TAGGCGAAGC GGTCCGCGTT CACCCTTGGA CCATGCGTGT GCTGCGCGAG
GCCCAGCGCA TGCACGAGCG TACCGGCGGC GTGTTCGACC CCACCGTGGC CCGCATGTTG
GTGGCACACA AAATTTTGCC CCGCCCAGCG GGGCCGACGG CGGAAGTCGA CGTGCGGTTT
GCGGATGTAG TGATGCTCGA TGAAAATCGC ATTAGTAAGC GGCGCGCACT ATGGTTGGAT
CTCGGTGGCA TCGCCAAAGG CTTTGCCGTG GACATGGCTA TCCTAAGTCT GCGGCGCCAC
AACGTTCGCA GTGGCGCCGT TTCGGCCGGA GGGGACCTGC GCGTCTTTGG CAAGCATGCA
CAGCCCATCC ACGTACGCAG TGCCAACGCG CCCGGTCGGC TAGAACTACT CGGTCGGCTC
ACCAACGGGG CCGTGGCCAC CAGCGGTCAC TATTTCGCAG AAAGCTTCGG ACTGCCCCCT
GGTACAGCAT CCATCCGGTC GCAACAAGCG CCGATGGAAG CGCCTTGCGC AGAGCGAACG
GTCACCGTCA TTGCCCCCCG CTGTATCTGG GCGGACGCAC TGACCAAGGT CGCCATGCTT
GCCGGTACGA CGGCGCCCGC CACGGTCCGC GCGCTATCAA GCTATCACGC ACACGTTGTT
GCATCATGA
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| Protein sequence | MIRRSKPLLG TFVEVRIDDV YPQDCAHLAE TAIAAAFSVI EQAEALMSFQ RSDSDLSRLH
AASVGEAVRV HPWTMRVLRE AQRMHERTGG VFDPTVARML VAHKILPRPA GPTAEVDVRF
ADVVMLDENR ISKRRALWLD LGGIAKGFAV DMAILSLRRH NVRSGAVSAG GDLRVFGKHA
QPIHVRSANA PGRLELLGRL TNGAVATSGH YFAESFGLPP GTASIRSQQA PMEAPCAERT
VTVIAPRCIW ADALTKVAML AGTTAPATVR ALSSYHAHVV AS
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