| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5370 |
|---|
| Symbol | |
|---|
| ID | 8007867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | + |
|---|
| Start bp | 261262 |
|---|
| End bp | 262128 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644822578 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_002973838 |
|---|
| Protein GI | 241114363 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.328033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATATCT GTGTAAGTTG CCATACACCC TTGAGGCCCT TCGCTTGGTC GTGCAGCGCT
TGTGGCTGGC GAGCCACCAT CCGTGATGGC GTCGCTTGCT TGGCGCCCGA GATGCTGCAG
GACAACGACG GCTTCCATGA GCCGCTGTTC GAGGAATACC AAAAGCTGCA GGCTGACCAC
TTTTGGTTCG TGCATCGCCG CAGGCTAATC GTGTGGGCGC TGCAGCGCCA TTTCCCGCAG
CTCCAGTCGT TTCTGGAAGT TGGCTGCGGC ACAGCGGAGA ACCTAGCCGC GATTGCAGAT
CGGTTTCGGC ACGCAGAAGT GTGCGGTGGG GAACCCTCGC TGAATGCACT CCAGATGGCG
CGCCGTCATT GCGGGGCGAA GTTCTTGCAA ATGGATGCTC GCGCGATACC GTTTGTTGAG
GCATTTGAGG TGGTCGGCGC CTTTGATGTC ATCGAGCATA TCGATGATGA TCGACGTGCC
CTAAGTGAGA TGTACAAGGC CTGCCGGCGC GGTGGCGGGC TGATCTTGAC AGTGCCCCAG
CACCCCCGGC TCTGGAGCCG CGTGGACGAT GCGGCCAAGC ACAAACGTCG CTATACGCGC
CGGGATCTCA TTGAAAAGTT GCGCGCCACC GGGTTCCGAC CGCTCTATGT CAACTCCTTT
ATGTCGCTGC TGCTACCGGT CATGGTTCTT TCGCGTCTGC ATCAAAAGAT CGCACGGACC
GAGCAGGAAG TTGACGAAGG CTTTCGTATC GGGAAAACGC TTAATCGCCT GTTCTCGACG
GTCTGCAACG TTGAGTCTCG CTTGCTTACC CGCGGCATTC ACTTTCCGGC CGGCGGCTCA
CTGCTCGCCA TTGCGGTCAA GGAGTAA
|
|---|
| Protein sequence | MHICVSCHTP LRPFAWSCSA CGWRATIRDG VACLAPEMLQ DNDGFHEPLF EEYQKLQADH
FWFVHRRRLI VWALQRHFPQ LQSFLEVGCG TAENLAAIAD RFRHAEVCGG EPSLNALQMA
RRHCGAKFLQ MDARAIPFVE AFEVVGAFDV IEHIDDDRRA LSEMYKACRR GGGLILTVPQ
HPRLWSRVDD AAKHKRRYTR RDLIEKLRAT GFRPLYVNSF MSLLLPVMVL SRLHQKIART
EQEVDEGFRI GKTLNRLFST VCNVESRLLT RGIHFPAGGS LLAIAVKE
|
|---|
| |