| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5360 |
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| Symbol | |
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| ID | 8007857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 251407 |
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| End bp | 253800 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644822568 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_002973828 |
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| Protein GI | 241114353 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.647165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA AACGACCACA TCCGCATACG TCATCCCCTG CGCCCGGGCA CGTCGGCGGA
GATTTGTGCG CACAAGGCGG GGACCACCAG CACGCCATGG CGAAGCAACT GACGCTTGTG
ACCGCCACCG AGGACCGAGA TCCAGTGTGC GGCATGGCAG TGAAGCTCGG TACGCCATAC
CAGTCAAACT ACGCGGGGGC GCGGTACGTC TTCTGTAGCG CGGCATGCCA GAGGAAGTTT
GAGGCGGAGC CAGCCAAGTA TGTCTCCGCC GGTGACGAAG CCAGTGCAGC ACCTGGCGCC
GTCTACACCT GCCCTATGCA TCCCGAGGTC CGTCAGGACC ATCCCGGGAG CTGCCCGAAA
TGCGGCATGG CGCTTGAGCC TGAGATGCCG AGCCTCGACG CCGACGAGAA TCCTGAACTC
GCAGCGTTCC GCCGGCGCTT CTGGTGGACC TTGCCGTTGA CGATTGCCAC CGCATTGCTT
GCGATGCTGG GTGAACATGC CTGGGCAATG GGGCCGACGG TGCAAAGCTG GGTGGAGTTC
GCATTATCTG CGCCCGTGGT CCTGTGGGCA GGCTTCCCCG TCTATGCCCG GTGCCTGCAA
TCGTTCCGAA ACCGCAGCCC AAATATGTGG ACGCTGATCG GTCTGGGCAC CGGCGCCGCG
TTCGTGTACA GCGTTGCGGC CACCGTGGCG CCCGACCTGT TCCCCCGCAG CTTTGTTGTG
CATGGCCGCA TTGCGGTCTA CTTCGAGGCC GCCGCCGTGA TCATTTCGCT GACGCTGCTC
GGCCAGATCT TCGAGCTGAG GGCGCGCTCA CAGACCTCGG CGGCCATCAA GTCGCTGCTT
GGTCTGGCAC CCAAGACAGC ACGCCGCATC AACCCGGACG GCAGCGAGGA GGACATCCCG
CTCACGCACG TGCATGTCGG TGACTTGCTG AGAATTCGGC CGGGCGAGAA AGTGCCGACC
GATGGCGTTG TGATTGAAGG TGTGAGTGCC ATCGACGAAT CGATGATCAC CGGTGAGCCA
CTGCCTGTCT TCAAGCGGGC GGGCGACCAC GTGATCGGCG CCACCCTCAA TACGTCGGGC
AGCCTGGTCA TGCGCTCGGA AAAGGTTGGC GCTCAGACGG TACTGTCCCA GATCGTGCAG
ATGGTAGCCC AGGCCCAGCG CTCGAAGGCG CCAATGCAGC GGATGGCGGA CCAGGTGGCC
GGGGTGTTCG TGCTGGTGGT GGTAGCCATC GCCGTGCTTG CCTTCTTCGG CTGGGGATTG
TTCGGTCCCG AGCCGAGCTG GGTCTTTGGG CTGGTCAACG CGGTGGCCGT GCTGATCATC
GCCTGTCCAT GCGCGCTGGG GCTGGCTACA CCGATGTCGA TCATGGTGGC GAGCGGCAAG
GCGGCGACCC AGGGCATTCT GTTCCGCGAC GCGGCGGCCA TCGAACATTT CCGCAAGGTC
GACACCCTGA TCGTCGACAA GACCGGCACG CTGACCGAAG GCCGTCCGGT CTTCGAGCGG
GCGTTGGCCG TCGATTCGCT CGATGAGACC ACGGTGCTGC GTCTGGCGGC GAGTCTCGAT
CAAGGCAGCG AGCACCCGCT GGCGGCCACC ATCGTTGCGG CGGCGCGTGA ACGGGGCCTG
ACCTTGGCGA AGGTCGAACA TTTCGCATCG GACGCGGGCA TGGGCGTGCG AGGCCGGGTT
GACGGTCACC AACTGATACT CGGCAATGCC TCCCTGATGC GTCGGGAGCA AGTCGATATT
GAATCGCAAG CGTTGCGGGC AAACGTGCTG GGGCAGTACG GCGCCAGTGT CATGTACCTG
GCCGTTGACC GGAAATTGGC GGGGCTGCTG ACGGTCTCGG ACCCGGTCAA GGCCAGCACC
CCCGAAGCGC TTGCGGCGCT CAAAGCAGCC GGGATTCGCG TGGTGATGGC AAGCGGCGAC
AGCATCGCGA CAACGCGAGC CGTGGCCGGC CCCCTTGGCA TTAACGAGTT TCATGGTGAG
GTCAAACCGG CCGACAAGCT GGCGCTGGTC GCAAAACTCC AGAGCGAGGG CCACGTGGTG
GCAATGGCTG GCGACGGCAT CAATGACGCA CCGGCACTGG CCAAAGCCGA TGTCGGCATT
GCCATGGGGA CAGGAACCGA TGTGGCAATG CATAGCGCCC AGGTCACGCT GGTCAAGGGT
GACCTGCGCG GCCTTGCGCG CGCACGGGAA CTGTCGCAGG CCACCATTGC CAATATGAAA
CAGAACCTGG GATTTGCGTT CGTCTACAAC GCGCTGGGCA TACCGCTGGC AGCCGGAGTG
CTGTACCCGT TCACCGGGTG GCTGCTGTCA CCGATGATCG CGGCCTTGGC CATGAGCCTG
AGTTCGGTGT CAGTGATTTC CAATGCGCTT CGGTTGAGAA CGCAGGTGTT TTAG
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| Protein sequence | MNDKRPHPHT SSPAPGHVGG DLCAQGGDHQ HAMAKQLTLV TATEDRDPVC GMAVKLGTPY
QSNYAGARYV FCSAACQRKF EAEPAKYVSA GDEASAAPGA VYTCPMHPEV RQDHPGSCPK
CGMALEPEMP SLDADENPEL AAFRRRFWWT LPLTIATALL AMLGEHAWAM GPTVQSWVEF
ALSAPVVLWA GFPVYARCLQ SFRNRSPNMW TLIGLGTGAA FVYSVAATVA PDLFPRSFVV
HGRIAVYFEA AAVIISLTLL GQIFELRARS QTSAAIKSLL GLAPKTARRI NPDGSEEDIP
LTHVHVGDLL RIRPGEKVPT DGVVIEGVSA IDESMITGEP LPVFKRAGDH VIGATLNTSG
SLVMRSEKVG AQTVLSQIVQ MVAQAQRSKA PMQRMADQVA GVFVLVVVAI AVLAFFGWGL
FGPEPSWVFG LVNAVAVLII ACPCALGLAT PMSIMVASGK AATQGILFRD AAAIEHFRKV
DTLIVDKTGT LTEGRPVFER ALAVDSLDET TVLRLAASLD QGSEHPLAAT IVAAARERGL
TLAKVEHFAS DAGMGVRGRV DGHQLILGNA SLMRREQVDI ESQALRANVL GQYGASVMYL
AVDRKLAGLL TVSDPVKAST PEALAALKAA GIRVVMASGD SIATTRAVAG PLGINEFHGE
VKPADKLALV AKLQSEGHVV AMAGDGINDA PALAKADVGI AMGTGTDVAM HSAQVTLVKG
DLRGLARARE LSQATIANMK QNLGFAFVYN ALGIPLAAGV LYPFTGWLLS PMIAALAMSL
SSVSVISNAL RLRTQVF
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