| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5356 |
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| Symbol | |
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| ID | 8007853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 247415 |
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| End bp | 248947 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644822564 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002973824 |
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| Protein GI | 241114349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGGTCATTGC AACGGCTGTG GGGCTCGTTC TTATCGGGAC CGCCATCTAT
GGCGCCTACC GGGTCGGCGT CACGCAGGGT GCCCGGTTGG CACCATCGTC GATGCCGGCC
AGCTCGGCAT CCGGCCTCAA GGCCGGCGAC GTCGATCCCC AGACCGGCAA GAAGGTACTG
TACTGGCACG ACCCCATGGT GCCCGGGCAG CGTTTCGACA AGCCGGGCAA ATCCCCCTTC
ATGGACATGC AGTTGGTGCC CGTCTATGCC GAGGGGGACG GAGGTAGCGG CATCGCGGTC
GATAGCCGTG TTGCGCAAAA CCTCGGCATC CGCACGACCG AAGTCAAAGC CGGCCGGTTG
AGCGCGGTGC TGGAGGCGCC CGGCAATATC GCCATCGACG AGCGCAGCGT GCAGGTGATC
CAGGCGCGCA CGAATGCCTT CGTCCAGCAC GTCGCGGTCA GGGCGACGCT TGACCCCGTG
CGGCGGGGGC AGGCACTGGT GACGCTGTAT TCGCCGGACT GGGTGGCGGC CCAGGAAGAG
TATCTGGCCG TGTTGCGCCA GTCGGCACAC GGTCAGGCCG ATCTCGCCGG TGCGGCCAAG
GCGCGCATGC TGCAGGCCGG CATGACGCCG GGTCAGGTCA GCGCGGTCGA GGCATCCGGC
CGGCTGCAGC CCAGCGTGGG CATCGCAAGC CCCATCGATG GCATCGTGAC TGAGGTTGCG
GTGCGAGACG GGATGACCGT CTCCCCCGGC ATGACGCTAT TCCGCTTGGC CGACCTGAGC
CAGGTCTGGG TCATTGCCGA GGTACCGGAA GGCCAAGCTC GCATCATCTC GCCTGGCCTC
GCGGTCAAGG TGACACCGAC CGGGGCAGTC GAGCCGCTGG TCGGCAAGGT CGACACCGTG
TTGCCCGACG TCAACCCGGC GACGCGGACC ATCAAGGTGC GCATCGTCCT GCCCAACAAG
GGCCGGCACC TGTTGCCGGG CATGTTTGCC ACGGTCCGCT TCGACAGCGG CGAGCACCAG
GACGTGCTGA CCATCCCGTT GGAGGCCGTC ATCCGTACCG GTCAGCGCAG CATTGTCATG
GTGGACGGAG GTCAGTCGGG CTTTGTGGCC ACCGAGATCA AGACCGGGCG CGAGGCCGGC
GGCATGGTCG AAGTCCTGGC GGGCCTCAAG GCTGGCCAGA AGGTAGTCAC CTCCGGCCAG
TTCCTGATCG ATTCGGAGGC CAGTCTGCGC GGCACCACCG AGCGCATGGC GGCGCCGGCC
GCGGCATCTG AGCCCGCGGC GGCCACCACC GAACACGAAG GCGTCGGTCG CATCGAGGCC
GTCACGGGTG AAGGCCTGAC AATCTCGCAT GGTCCGATCC CCTCGATTCA GTGGGGTGCC
ATGACGATGG ATTTCGCGGC GCCGTCCGCC GGGCTACCGA AGGGACTGAA GGCGGGTGAC
CGGGTGCGAT TCCGCTTCCA CCTGGATAAG GACGGCATGG CAGTCCTCTC CTCGGTCGCG
CCCGCCGGCG CGGATCAGGG AGGCAAGCCA TGA
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| Protein sequence | MKKLVIATAV GLVLIGTAIY GAYRVGVTQG ARLAPSSMPA SSASGLKAGD VDPQTGKKVL
YWHDPMVPGQ RFDKPGKSPF MDMQLVPVYA EGDGGSGIAV DSRVAQNLGI RTTEVKAGRL
SAVLEAPGNI AIDERSVQVI QARTNAFVQH VAVRATLDPV RRGQALVTLY SPDWVAAQEE
YLAVLRQSAH GQADLAGAAK ARMLQAGMTP GQVSAVEASG RLQPSVGIAS PIDGIVTEVA
VRDGMTVSPG MTLFRLADLS QVWVIAEVPE GQARIISPGL AVKVTPTGAV EPLVGKVDTV
LPDVNPATRT IKVRIVLPNK GRHLLPGMFA TVRFDSGEHQ DVLTIPLEAV IRTGQRSIVM
VDGGQSGFVA TEIKTGREAG GMVEVLAGLK AGQKVVTSGQ FLIDSEASLR GTTERMAAPA
AASEPAAATT EHEGVGRIEA VTGEGLTISH GPIPSIQWGA MTMDFAAPSA GLPKGLKAGD
RVRFRFHLDK DGMAVLSSVA PAGADQGGKP
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