| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5352 |
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| Symbol | |
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| ID | 8007849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 240388 |
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| End bp | 242787 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644822560 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_002973820 |
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| Protein GI | 241114345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.448816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAT GCGGCCCGAA GGGATGCGAT TGCGCTGCTG TCAACGTGGC GCCTCCGGCC
CCCGATGCAA CTGGCGTCGA TTTGAAGCGC TCGCGCTACC GGATCGACAA CATGGATTGC
CCAACCGAGG AAGCGCTCAT TCGCAACAAG CTGGCGACGT TGCCTGGGGT GGTGAAGCTT
GAGTTCAATC TGGTACAGCG TTCGCTGACC GTCAATCACC GGCTGCCGTC CCCGGCCTCA
ATCGAACAGG CGTTGTCGGC CATTGGCATG CAAGCCGTGC GCGCGGAAGA GACGCGTTCC
GCGCAAAGCA CGGTCCTGAC CATCCGGCAG ATGGACTGTC CCACTGAGGA AGCACTGATT
CGGGGCAAGC TGGCGGGCGT GCCGGGTGTG GCCGGTCTTG ATTTCAACCT CGTTCAGCGC
ACGCTGGCGG TCCGTCACGC TGCGCACACG TTGCCCCAAG TATTGGCCGC CATCCAATCG
CTTGGCTTCG ATGCCGAGGT CCGCGACACC TCCGCTGCCG CACCCGCTTC TGTGCCGGAT
GCCGCGCCCA CCAAATGGTG GCCGCTTGCC ATTTCCGGGG CGAACGCCGT ACTGGCGGAG
GTCGTCTATT GGCTCAACGG TGGCAATCAC TGGGTGGTGG TGGTCCTGGC ATTAGCCGCG
ATCCTGACCG GCGGGCTCAC CACCTACAAG AAAGGCTGGA TCGCGCTCAA GAACCGCAAC
CTGAACATGA GTGCCCTCAT GTCGATTGCG GTGACGGGCG CGATGGTGAT CGGCCACTGG
CCGGAAGCAG CGATGGTGAT GGTCTTGTTC GCGCTGGCCG AAGTCGTCGA AGCCCGGTCG
CTGGATCGTG CGCGTGACGC GATCCGTGGT TTGATGGATC TCGCGCCCGA GACCGCCATG
GTTCAGCGCA GCGATGGGAG CTGGGGCGAC GTCGATGCCA AGACCGTTGC CGTCGGCAGC
CGGGTGCGGG TCAAGCCGGG CGAGCGCATC GCGCTCGATG GCGAGGTGCT GCAGGGGCGC
TCCTCCGTGA ACCAGGCACC GATTACGGGC GAGAGCCTGC CGGTCGAGAA GGCGGAAGGC
GACCCGGTGT TCGCCGGCAC CATCAACGAG TCCGGATCGT TCGAGTACCG CGTCACCGCG
GCGGCAAGCG ACTCTACGCT GGCACGCATC ATCCACGCAG TGGAGGCTGC TCAAGGCAGT
CGCGCACCCA CGCAGCGTTT CGTTGATCAG TTCGCCCGGC TGTACACCCC CATCGTCTTC
GCCGTCGCGC TGGCGGTGGC CATCTTGCCG CCGCTCCTGT TCGGTGCCGC CTGGCTGGAT
TGGATCTACA AGGCCCTCGT ACTGCTGGTG ATCGCGTGTC CCTGCGCCCT CGTGATTTCG
ACGCCGGTGA GCATCGTGAG CGGCCTGGCC GCCGCCGCGC GACGCGGCAT CCTGATCAAG
GGCGGGGTCT ATCTCGAAGA GGGGCGCAAG CTGAAATGGT TGGCGCTCGA CAAGACCGGC
ACCATCACAC ACGGCAAGCC GGCGCTCACC GATGTCATGG CCTGGAACGG CACAGACCCC
TCGGCCGCCG AGAGGCTTGC CGCCAGCCTG GCGATTCGCT CCGACCACCC CGTCTCTCAG
GCGGTGGCCC GCGCAGCGCA GGACAAAGGT CTCACCCCAG GCGAGGTCGC CGATTTCGCG
GCCATGCCTG GGCGCGGCGT CCGGGGCCAT ATCGACGGTG CGCTCTATCA CTTGGGCAAT
CATCGCCTGG TTGAGGAACT CGGGGTGTGC TCGCCGGCAT TGGAAACCAA CCTTGCCACC
CTCGAAACCC AGGGCAAAAC CGTCGTGATG CTGATCGGCC CGGACGGCGT ACGCGCGCTG
TTCGGCGTGG CCGACACCAT CAAGGACAGC AGTCGCCAGG CGATCAAGGA CCTGCACGCG
CTGGGCATCA AAACCGTGAT GCTCAGTGGT GACAACCCGC ACACCGCGGA GGCGATCGCG
CAGCAAGTGG GTATCGACAA AGCTCGGGGC AACCTGCTAC CGGAAGACAA GCAGCGCGAA
ATCGAGCAGC TATCGGCACA GGGAACCATC GGCATGGTCG GCGATGGCAT CAACGACGCG
CCGGCGCTGG CACGGGCCGA TATCGGTTTC GCGATGGGGG CCGCCGGGAC GGACACGGCG
ATCGAAACGG CCGACGTCGC GCTGATGGAC GACGATCTGC GCAAGCTCCC GGCCTTTGTA
CGGCTATCCC GGTCCACGGC GGGAGTTCTG AAGCAGAACA TTGCGCTGGC GCTCGGCATC
AAGGTGGTGT TCCTGGTGCT GACCTTTACC GGCCAGGCCA CCATGTGGAT GGCGGTGTTT
GCCGACATGG GGGCCAGCCT GCTGGTGGTC GGCAACGGGC TGAGGTTGCT GCGCAAATGA
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| Protein sequence | MSECGPKGCD CAAVNVAPPA PDATGVDLKR SRYRIDNMDC PTEEALIRNK LATLPGVVKL
EFNLVQRSLT VNHRLPSPAS IEQALSAIGM QAVRAEETRS AQSTVLTIRQ MDCPTEEALI
RGKLAGVPGV AGLDFNLVQR TLAVRHAAHT LPQVLAAIQS LGFDAEVRDT SAAAPASVPD
AAPTKWWPLA ISGANAVLAE VVYWLNGGNH WVVVVLALAA ILTGGLTTYK KGWIALKNRN
LNMSALMSIA VTGAMVIGHW PEAAMVMVLF ALAEVVEARS LDRARDAIRG LMDLAPETAM
VQRSDGSWGD VDAKTVAVGS RVRVKPGERI ALDGEVLQGR SSVNQAPITG ESLPVEKAEG
DPVFAGTINE SGSFEYRVTA AASDSTLARI IHAVEAAQGS RAPTQRFVDQ FARLYTPIVF
AVALAVAILP PLLFGAAWLD WIYKALVLLV IACPCALVIS TPVSIVSGLA AAARRGILIK
GGVYLEEGRK LKWLALDKTG TITHGKPALT DVMAWNGTDP SAAERLAASL AIRSDHPVSQ
AVARAAQDKG LTPGEVADFA AMPGRGVRGH IDGALYHLGN HRLVEELGVC SPALETNLAT
LETQGKTVVM LIGPDGVRAL FGVADTIKDS SRQAIKDLHA LGIKTVMLSG DNPHTAEAIA
QQVGIDKARG NLLPEDKQRE IEQLSAQGTI GMVGDGINDA PALARADIGF AMGAAGTDTA
IETADVALMD DDLRKLPAFV RLSRSTAGVL KQNIALALGI KVVFLVLTFT GQATMWMAVF
ADMGASLLVV GNGLRLLRK
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