Gene Rpic12D_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5342 
Symbol 
ID8007839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp232372 
End bp233205 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content67% 
IMG OID644822550 
Productputative cointegrate resolution protein S / recombinase 
Protein accessionYP_002973810 
Protein GI241114335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA TCGACCGATA CCTGGAAGCC GCAACCCGCG ATCACACGCG ACGCAGCTAT 
CAGTCTGCCA TCCGCCATTT CGAGCGGGAA TGGGGAGGCT TCCTGCCGGC CAGCGCCGAC
AACATTGCGC AGTATTTGGC CGAGCACGCG CAGACGCTTT CCATCAACAC GCTGCGTCAG
CGTTTGGCTG CGATCGCGCA ATGGCACATC TCGCAGGGCT TTCCGGACCC CACCCGAGCG
CCACATGTCC GCAAGGTTCT GAAGGGCATC CAGGCGCTGC ACCCGGCCCA GGAGCGACGT
GCCAAGCCGC TGCAGCTCGC CCAACTGGAG CAGTTGGTGG CGTGGCTGGA CGCGCAAATT
GCGGCAGACT CGGCCGCGGG AAACGTCCAT CCACTACAAG TTCATGCCCG CAACAAGGCG
CTGGTGCTGA TCGGCTTCTG GCGGGGCTTC CGCTCCGACG AACTGAGCCG GCTGCAGATC
GAGCACATCA CGGTCGAGGC CGGCCGGGGC ATGACGATCT TCCTGCCGCG CACCAAGACG
GACCGCAACC ACGTGGGCAC CACCCACAAG GCACCGGCCC TGTCGCGCTT GTGTCCGGTC
GCCGCCTACG AGGCTTGGCT GGGCGCATCC GGATTGGCCG GCGGCCCCGT GTTCCGACGG
ATCGATCGCT GGGGACGGAT GGCCGACGAC GGGCTGCAGG CCAGCAGCAT CGTGCCGTTG
CTGCGTTCGC TGTTTCGTGA CGCAGGCCTG GCGCAGGCGG GTAGCTACAG CAGCCACTCG
CTGCGGCGCG GCTTCGCCAC CTGGGCCAAT GGGAGGGATG GCCGGGATTC GTAA
 
Protein sequence
MADIDRYLEA ATRDHTRRSY QSAIRHFERE WGGFLPASAD NIAQYLAEHA QTLSINTLRQ 
RLAAIAQWHI SQGFPDPTRA PHVRKVLKGI QALHPAQERR AKPLQLAQLE QLVAWLDAQI
AADSAAGNVH PLQVHARNKA LVLIGFWRGF RSDELSRLQI EHITVEAGRG MTIFLPRTKT
DRNHVGTTHK APALSRLCPV AAYEAWLGAS GLAGGPVFRR IDRWGRMADD GLQASSIVPL
LRSLFRDAGL AQAGSYSSHS LRRGFATWAN GRDGRDS