Gene Rpic12D_5340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5340 
Symbol 
ID8007837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp230227 
End bp230718 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content62% 
IMG OID644822548 
Productprotein of unknown function DUF411 
Protein accessionYP_002973808 
Protein GI241114333 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA AATCGCCGAC TGCCAAGCCC GTGTCCGCGA CAAGACGGTC CCTGATTGCA 
GGTCTGTTAC TGCTGCCTGC CGTAGCCCTG GCGCAAAAGG CCGGATCGAA ACCCGTGATC
CAGGTGTGGA AAACGCCGGG TTGCGGCTGC TGCAAGGATT GGCTTGCCCA CTTGCGGGAC
AACGGGTTCG ACGTGGTTGC ACATGACGTC GAGGAAACGG TGGAAGCCAG GCGAAAGGCT
GGCATGCCAG AGCGCTATGC CTCTTGTCAC ACGGGCATCG TGCAGGACTA TGCGCTGGAA
GGCCATGTTC CGGCACGCGA AATCAAGCGT CTGCTGCAGG AGCGCCCGAA AGCGATCGGG
CTGGCGGTCC CCAGCATGCC GCTCGGCGCC CCTGGCATGG ATGGGCCGGC ATACGGTAAT
CGGCGCATGC CATACAACGT CCTGCTGATC GGATTGGACG GACAGGCCAC CGTGTTCCGC
GCATACAGCT GA
 
Protein sequence
MMMKSPTAKP VSATRRSLIA GLLLLPAVAL AQKAGSKPVI QVWKTPGCGC CKDWLAHLRD 
NGFDVVAHDV EETVEARRKA GMPERYASCH TGIVQDYALE GHVPAREIKR LLQERPKAIG
LAVPSMPLGA PGMDGPAYGN RRMPYNVLLI GLDGQATVFR AYS