Gene Rpic12D_5339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5339 
Symbol 
ID8007836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp229269 
End bp230198 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content61% 
IMG OID644822547 
Productcopper resistance D domain protein 
Protein accessionYP_002973807 
Protein GI241114332 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG ATTGGCTCAA TATCGCCCTG CGCTTTGGGC TGTACCTGGA CTTGACGATC 
CTTTTCGGGG TCTCGCTGTT CGGGGTCCAG GCGTTGCGAC CCGATCACCG GGCCACGGCG
ATTGCGCGCC GATACGTCCG TGCCGTCGGA GTCACTGCCG CATTGGGCAT CGTGCTGTCG
CTCTGGAGCT TCGTTGTCAT GGCCAAGGCG ATGACGGGGG CCACCGAGTA CGCTGAACTC
ACCAGCCATG TCTTCAGCAT GATGCTGACC ACCACCGCGG TTGGCCTGGC CTGGATGGCG
CGATTGGTGG CCCTGGCCGG ATGCTTGGTC GCCGTTGCGC GTTTGCGGAA GCACCCAGCG
CCTCACTTCG GCGTGTGCGC CGGGCTGGGT GCGGTGGCTC TGCTAACGGT CACTTGGGCC
GGGCATGGGG CGATGGACGA CGGTGTGAAG GGATACCTTC ATCTCACATT TGATATCGCG
CACGTTTTGG CCGCGGGCGC CTGGGTTGGC GCATTGGCAG CGTTTGTGCT GCTGGCGTCG
ACAAGACAAG CGGCCTCATC GGAAACGGTG GAAATCCTTA GTCACACATC CAATGGCTTC
GCGCGTCTTG GGACGCTGAT TGTTGCCACG CTGTTTGCGA CAGGGACGTT CAACTATTTT
TTGATCGTTG GGCCGACGAT TAACGGGTTG TTCACCACGC CATACGGGCG CTTATTGTTG
ATCAAGCTGG CTTTGTTCGC GCTGATGCTC GGACTGGCCG CAGCCAATCG TTATCGGCTG
AGCCCACGGC TTGCGGCGGC GGTTAGGGCC GCAGACCACG TCCACGCGGT GATAGCACTG
CGCCGCAGTC TGGTCATGGA AACCAGCCTT GCCATACTGA TTTTGGCGTT GGTCGCTTGG
CTTGGTGTGC TTTCGCCGCC TGGAACCTGA
 
Protein sequence
MADDWLNIAL RFGLYLDLTI LFGVSLFGVQ ALRPDHRATA IARRYVRAVG VTAALGIVLS 
LWSFVVMAKA MTGATEYAEL TSHVFSMMLT TTAVGLAWMA RLVALAGCLV AVARLRKHPA
PHFGVCAGLG AVALLTVTWA GHGAMDDGVK GYLHLTFDIA HVLAAGAWVG ALAAFVLLAS
TRQAASSETV EILSHTSNGF ARLGTLIVAT LFATGTFNYF LIVGPTINGL FTTPYGRLLL
IKLALFALML GLAAANRYRL SPRLAAAVRA ADHVHAVIAL RRSLVMETSL AILILALVAW
LGVLSPPGT