Gene Rpic12D_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5338 
Symbol 
ID8007835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp228878 
End bp229264 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content60% 
IMG OID644822546 
Productcopper resistance protein CopC 
Protein accessionYP_002973806 
Protein GI241114331 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGT CTCGTTTTGC CACCAAGGCC ATCATTGGCA CGTCCTTGGC GCTTCTGGCT 
TCGGCCGCGT TCGCGCATCC CAAACTGGTC TCTTCGACGC CCGCCGATCA GGCGGAAGTG
ACTGCGCCGA CGAAGATCGA GCTGAAGTTC TCGGAGACCC TCACGACACA ATTCTCCGGG
GCCAATCTCG TCATGACGGA GATGCCCGGC ATGTCGGGGC ATAACCCGAT GAAGGTTGGC
GCAAAAGTCT CCGCCGGCGA CGACGCCAAG ACGATGGTCA TCACGCCCGC ACAACCGCTG
ACGACCGGGA CGTACAAGGT GGAGTGGCGC GCGGTCTCGT CGGATACCCA CCCGATGACG
GGGAATTTCA CGTTCAAGGT GAAGTAA
 
Protein sequence
MFTSRFATKA IIGTSLALLA SAAFAHPKLV SSTPADQAEV TAPTKIELKF SETLTTQFSG 
ANLVMTEMPG MSGHNPMKVG AKVSAGDDAK TMVITPAQPL TTGTYKVEWR AVSSDTHPMT
GNFTFKVK