| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5336 |
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| Symbol | |
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| ID | 8007833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 225976 |
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| End bp | 227871 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644822544 |
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| Product | copper-resistance protein, CopA family |
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| Protein accession | YP_002973804 |
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| Protein GI | 241114329 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCA ATCGTGCATC CGGCCTCGTG CTACCGAACC TGCCGCGGCG GCGGTTTGTG
CAAGGTTTGG CTGCCGGCGG TGTCATCGCC GGTTTGGGCC TGGGTGGTTT CACTTCGGCG
GCATCCGCTG CGTCCACCGC GCTGGGGACC GCACCAGTGC TGCGCGGCAC CGAATTCGAC
TTGGTGATCG ACGAGACGCC GGTCAACTTC ACGGGCAAGC CGGCTATGGC CACGACCATC
AATGGCATGC TCCCGGGGCC CACGCTGCGC TGGCGCGAGG GTGACACCGT CACCTTGCGC
GTGACCAATC GCCTGCGCGA GCCGACGTCA ATCCACTGGC ACGGCATTGT CCTGCCGTTC
GAGATGGATG GCGTACCGGG CATCAGCTTC CACGGCATTC CGCCCGGCGA GACCTTTACC
TACCGCTTCA AGGTGCGACA AAGCGGCAGC TACTGGTACC ACTCGCATTC GGGCTTCCAG
GAGATGACCG GGGTCTATGG CGCCCTCATC ATCGATGCCG CCGGCGGTGA CGCGATCCGG
GCCGACCGCG ATTACAGCGT GCTGCTGTCG GACTGGACCG ACGAAGATCC GATGCGCGTC
CTCTCCAAGC TCAAGACGCA GGGCGACTAC TACAACTACC ACCAGCCTAC GGTGGTGGAC
TTCTTCCGCG ACGTTTCCAA CGATGGCTGG AAGGCGGCCA TGGAAAAGCG GGCCATGTGG
AACCAGATGC GCATGAACCC GACCGATCTG GCCGATCTCT CCAGTGCAAC GCTCACCTAT
CTGACCAACG GCGTCACGCC GGCCGGCAAT TGGACGGGCC TGTTTACGCC GGGCGAGACT
GTGCGGTTGC GCTTCATTAA CGGCTCCGGC AACACGTTCT ACGACGTGCG CATCCCGGGG
CTGAAACTCA AGGTGGTTCA GGTCGATGGG CAGAACATCG AGCCGGTCAC GGTGGACGAA
TTCCGCTTCG GCCCCGGCGA GACTTGCGAT GTGCTGGTCG CGCCCAAGGA CGACGCCTAC
ACCATCTTCT CGCAGTCGAT GGACCGTACT GGTTATGCAC GTGGCACGCT GGCTGTCTGC
CGGGGCTTGC AGGCTGCAGT GCCTGCGCTC GACAAGGTGG AATGGCTGTC CATGGCTGAC
ATGATGGGTG ACATGGGCGG TATGGGTGGC ATGAGCCACG GTGGCATGTC GGGCATGGAC
CATGGTGCGA TGTCCGGTAT GAACCACGGC GGCATGCCCG GTATGGATCA TGGCGACATG
CAGATGATGG ACGACACTGG CATGACCATG ATGGACTCCG GCGGCATGCA GATGATGGAC
CACAGCCAGC ATGCGGAATC CGGCGGAGCG GCTAACAGCT TGAAGGTGCC GAGCAAGACA
GCACGGCACG CGCGCACGGA ATACGGTCCG AGCACCGATA TGCACGTCGA CATGGCGCGC
ACCAACCTGG ACGATCCCGG CGTCGGTCTG CGCAACAACG GGCGCCGCGT TCTGGTGCTC
GCCGACATGC ATACCATCGG CGGTCCGATG GATAAGCGCG GTCCGGAGCG CGAGGTGGAA
CTGCACCTCA CCGGCAACAT GGAGCGCTAC ACGTGGTCGT TCGACGGCGT GGAGTTCGGC
AAATCGACAC CTGTGCACTT CCGTTATGGC GAACGGCTGC GCGTCATCCT CCACAACGAC
ACGATGATGA CGCACCCCAT GCACCTGCAT GGTATGTGGA GCGAACTGGA AGCGCCGGAC
GGTACGTTCC TCGCGCGCCG GCATACCATC CCCGTCCAGC CCGCCCAACG GATCAGCTTT
CTCGTCACAG CGGACGCGCT GGGTCGCTGG GCCTGGCATT GCCACCTGAT GTTGCACATG
GATGCGGGTA TGTTCCGCGA AGTGGTGGTG GTCTGA
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| Protein sequence | MRSNRASGLV LPNLPRRRFV QGLAAGGVIA GLGLGGFTSA ASAASTALGT APVLRGTEFD
LVIDETPVNF TGKPAMATTI NGMLPGPTLR WREGDTVTLR VTNRLREPTS IHWHGIVLPF
EMDGVPGISF HGIPPGETFT YRFKVRQSGS YWYHSHSGFQ EMTGVYGALI IDAAGGDAIR
ADRDYSVLLS DWTDEDPMRV LSKLKTQGDY YNYHQPTVVD FFRDVSNDGW KAAMEKRAMW
NQMRMNPTDL ADLSSATLTY LTNGVTPAGN WTGLFTPGET VRLRFINGSG NTFYDVRIPG
LKLKVVQVDG QNIEPVTVDE FRFGPGETCD VLVAPKDDAY TIFSQSMDRT GYARGTLAVC
RGLQAAVPAL DKVEWLSMAD MMGDMGGMGG MSHGGMSGMD HGAMSGMNHG GMPGMDHGDM
QMMDDTGMTM MDSGGMQMMD HSQHAESGGA ANSLKVPSKT ARHARTEYGP STDMHVDMAR
TNLDDPGVGL RNNGRRVLVL ADMHTIGGPM DKRGPEREVE LHLTGNMERY TWSFDGVEFG
KSTPVHFRYG ERLRVILHND TMMTHPMHLH GMWSELEAPD GTFLARRHTI PVQPAQRISF
LVTADALGRW AWHCHLMLHM DAGMFREVVV V
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