| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5335 |
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| Symbol | |
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| ID | 8007832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 225118 |
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| End bp | 225804 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644822543 |
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| Product | two component heavy metal response transcriptional regulator, winged helix family |
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| Protein accession | YP_002973803 |
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| Protein GI | 241114328 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.733276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.970872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGT TGGTCGTCGA GGACGAGCCC AAAACCGGAG AGTATCTGCA GCAAGGCCTG
ACCGAAGCCG GCTTTGTGGT CGATCTGGCA CGCAACGGTA CTGACGGCCG CCATCTGGCC
ATGTCGGGCG ACTACGACTT GCTGTTGCTG GACGTGATGC TGCCTGACGT GGATGGCTGG
CAGATCGTCC AATCGTTGCG CGCTGCGGAA CAGGCGGTGC CGGTGTTGTT CTTGACCGCC
CGCGACAGCG TGGCCGACCG CGTCAAAGGC CTTGAAATGG GCGCCGACGA CTACTTGGTG
AAGCCATTCG CGTTTGCTGA GTTGCTAGCC CGGGTCCGCA CGCTGCTGCG CCGGGGAACC
GGTGCCGTCT CGTCCGACCG AATCCAAGTG GCCGACCTTG TGCTGGATTT GGCTCGCCGT
CGTGCCTCAC GCGGAGGCCA GAAGATCCCG CTGACGAGCA AGGAGTTCTC CCTGCTGGAG
CTGCTGGTCC GCCGCCGTGG CGAGGTCTTG CCTCGCTCCC TGATCGCCTC GCAGGTCTGG
GACATGAACT TCGACAGTGA TACCAATGTG ATCGACGTCG CCATTCGCCG GTTGCGCGCC
AAGATCGACG ACCACTTCGA GCCGAAGCTG ATCCAAACGG TACGCGGCAT GGGTTATGTA
CTGGAAGCGC CCGAGGACGC GGCCTGA
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| Protein sequence | MKLLVVEDEP KTGEYLQQGL TEAGFVVDLA RNGTDGRHLA MSGDYDLLLL DVMLPDVDGW
QIVQSLRAAE QAVPVLFLTA RDSVADRVKG LEMGADDYLV KPFAFAELLA RVRTLLRRGT
GAVSSDRIQV ADLVLDLARR RASRGGQKIP LTSKEFSLLE LLVRRRGEVL PRSLIASQVW
DMNFDSDTNV IDVAIRRLRA KIDDHFEPKL IQTVRGMGYV LEAPEDAA
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