Gene Rpic12D_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5333 
Symbol 
ID8007830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp223212 
End bp223598 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID644822541 
Productcopper resistance protein CopC 
Protein accessionYP_002973801 
Protein GI241114326 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.726356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA GTCGCCGCGC ATTGCGAGGC TCAGTCACCG TCCTGTTCGC GATTCTGAGC 
GAGATCGCTC TCGGCCATCC AAAGCTGGTT TCATCGAGAC CAGCGAACAA TTCTGAAGTG
GCCGCCCCAA AGCGAATCGA ATTGAGATTT TCAGAGGAAC TTGTATTCCC GCCTTCGGGA
GGTAATCTAG TTATGGCGTG GCTGCCGGGC CGGGCGCTTC ACGGGCCGAT GAAGATTCCG
GCTGAAGTAT CGCGTGGCGG AGACGCCAAG ACGGTCGTTA TTCAGCCGAC TCAACCTCTC
ATGGCTGGTT CCTATCGCGT TGACTGGCAA GCGGTCTCAT CCGATGGGCA TCCTGTCAAT
GGCAGGATCG TATTCCGAGT ACGATGA
 
Protein sequence
MSASRRALRG SVTVLFAILS EIALGHPKLV SSRPANNSEV AAPKRIELRF SEELVFPPSG 
GNLVMAWLPG RALHGPMKIP AEVSRGGDAK TVVIQPTQPL MAGSYRVDWQ AVSSDGHPVN
GRIVFRVR