Gene Rpic12D_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5317 
Symbol 
ID8007814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp207161 
End bp207457 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content60% 
IMG OID644822526 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_002973786 
Protein GI241114311 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA AGACAAAGCG GGCGCAGTAC ACGCTGGAAT TCAAGCTGGA AGCGGTACGG 
CTGGTGAAGA GCGGGCAGAG CATGGCAGTG GTTAGCGCGA CCCTGGGCAT CAGAGCGCAG
ACGCTGCATA ACTGGGTCAA GGCGGAGCGG GAAGGCAAGC TGACTGGTGC GGGTATGAAG
CCGGTCAGCC CGGAGCAGAT GGAGCTGGCC CGGCTTCGGG CGGAGGTGGC GCGCTTGAAG
ATGGAGCGCG ATATTTTAAA AAAAGCCGCA GCATACTTTG CGAAGGAGTC GGTGTGA
 
Protein sequence
MTSKTKRAQY TLEFKLEAVR LVKSGQSMAV VSATLGIRAQ TLHNWVKAER EGKLTGAGMK 
PVSPEQMELA RLRAEVARLK MERDILKKAA AYFAKESV