| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5314 |
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| Symbol | |
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| ID | 8007811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 203798 |
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| End bp | 205888 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644822524 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_002973784 |
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| Protein GI | 241114309 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.130847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCA ACCTCGGCGA TTTCCAAGCG TCAATACTGG GAACGCATAC CAATGCGCGG
TTGTCCGGCG CCTACCCAGG CCGCCCACCA ACCTTCCCAG CATTGGAGAC CAGACTCACT
TTCAATAAGG TCGACTTGGA GAAGAATCCC ATGGAACCGC GACAGCAACA GTTCTCCCTC
TGGTACGTGC TCGTGACCAT ACTGGCCATG CTTGCAATCC AGACGCTCTT CGTGTCGGGG
CATGTCGAGA CGATCCCATA CAGCGATTTC AAGGTCCTAC TGAAGGCTGG CAAGCTCAAG
GACGTGGCTA TTGGTGAGCA GGCTATCAGC GGAACCTTCT CGACAGAAGG TATCGACAAT
CTCCTTGCCA AGCAGCAGAT CGAGGAAATC CGCCGAGAGG CAAAGGGCGA CCACGCCTTC
TCCACGCTTC GAGTGGCCGA TCCTGAGCTG GTGCAGGAGC TCGAAGCGGC AAAGGTGCGC
TTCGTCGGGC AGCCCGACAA CAAATGGCTG AGCACGATCC TCTCGTGGGT TGTGCCGGCC
GTCATCTTTT TCGGTATCTG GAGCTTTCTC ATCAAGCGCG TGGGCGGCGC CGCCGGCAGC
ATGATGGAAA TTGGCAAGAG CAAGGCAAAG GTCTACATGC AAAAGGAGAC CGGCGTGACT
TTTGCCGACG TGGCTGGAAT CGACGAAGCC AAGGAGGAGC TGTCGGAGAT TGTTAGCTTC
CTGAAAGATC CTCAGCGGTA CCAGCGCCTG GGCGGAAAAA TTCCCAAGGG CGTGCTGCTG
GTTGGGGCCC CGGGCACTGG CAAGACCTTA TTGGCAAAGG CCGTGGCAGG CGAAGCCGGC
GTGCCATTCT TCAGCATGAG CGGCTCCGAC TTCGTCGAGA TGTTCGTTGG TGTGGGTGCA
GCACGGGTCC GCGATCTCTT TAAGCAAGCC GAAACCAAAG CCCCCTGCAT CATCTTCATT
GATGAGCTTG ACGCACTCGG AAAGACGCGA GCACTGAATG CGGTCGGCGG CAACGAGGAG
CGCGAACAAA CACTGAACCA GCTTCTGGTC GAGATGGACG GTTTTGATAG CAACAAAGGC
GTCATCATCA TGGCCGCCAC AAACCGACCC GAGATACTGG ACCCCGCCCT GCTTCGCCCC
GGTCGCTTTG ACCGCCACGT CGCACTGGAC CGGCCTGACC TCAAGGGACG GGAGCAGATT
CTCAAAGTTC ACGTCAAGGG CGTTGTCCTC GCTCCTGAGG TCGACCTGAC TAAACTCGCC
GGACGGACCC CGGGGTTCGC AGGTGCCGAT CTTGCCAACT TGGTTAACGA AGCCGCGCTC
CTTGCCGCGC GCAAGAGCAA GCAAATGGTC GAGATGGCAG ATTTCGACGA GGCGCTTGAC
CGGATCGTCG GCGGCCTGGA AAAAAAGAAC CGCGTGATGA ATCCGAAGGA GAAGGAAACT
ATCGCATTCC ACGAGGCAGG ACATGCCATC GTCGCGGAGC ATCGGCCGCT GGCTGACCGT
GTCTCCAAAG TTTCCATCAT TCCGCGGGGC GTTGCGGCGT TGGGTTACAC GCAACAGACC
CCAACCGAGG ACCGCTACCT GCTCAAGCGC AGCGAACTGC TTGACCGGCT CGATGTCTTG
CTCGGTGGCC GTATTGCGGA ACAGCTCATT TTCGGCGACG TATCCACGGG CGCACAGAAC
GACCTGCAGC GCGCAACCGA CATGGCTCGG CAGATGATTA CCCAGTTTGG CATGAGCGAC
CAGCTGGGCC TGGCCACGTA CGAGAATATG CCGAACCCGC TCTTTGCTGG GACGGGGCTA
ATGCAGCGCG AACGCAATGA ATACAGCGAG AGCACCGCAC AGATGATTGA TGCTGAAGTC
CGTAAGCTAT TGGCAGAAGC AAGTCATCGC GTACAAGCGA CGCTGGAAGG ACAGCGGACC
AAGCTCGATG CTCTGGCCCA ATTACTTCTC GAGAAGGAAG TGGTTGACCG CCAAGACCTG
GACATGTTTT TGTCAGCGAA GGTGACGCCA ATGCCTCCGC CCAAGCCCGT CGCGAATATC
GAGGAGTCAA CTGCAACGGG GAAACCGGAC CAAAAAACGC AAGGCACATA G
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| Protein sequence | MKVNLGDFQA SILGTHTNAR LSGAYPGRPP TFPALETRLT FNKVDLEKNP MEPRQQQFSL
WYVLVTILAM LAIQTLFVSG HVETIPYSDF KVLLKAGKLK DVAIGEQAIS GTFSTEGIDN
LLAKQQIEEI RREAKGDHAF STLRVADPEL VQELEAAKVR FVGQPDNKWL STILSWVVPA
VIFFGIWSFL IKRVGGAAGS MMEIGKSKAK VYMQKETGVT FADVAGIDEA KEELSEIVSF
LKDPQRYQRL GGKIPKGVLL VGAPGTGKTL LAKAVAGEAG VPFFSMSGSD FVEMFVGVGA
ARVRDLFKQA ETKAPCIIFI DELDALGKTR ALNAVGGNEE REQTLNQLLV EMDGFDSNKG
VIIMAATNRP EILDPALLRP GRFDRHVALD RPDLKGREQI LKVHVKGVVL APEVDLTKLA
GRTPGFAGAD LANLVNEAAL LAARKSKQMV EMADFDEALD RIVGGLEKKN RVMNPKEKET
IAFHEAGHAI VAEHRPLADR VSKVSIIPRG VAALGYTQQT PTEDRYLLKR SELLDRLDVL
LGGRIAEQLI FGDVSTGAQN DLQRATDMAR QMITQFGMSD QLGLATYENM PNPLFAGTGL
MQRERNEYSE STAQMIDAEV RKLLAEASHR VQATLEGQRT KLDALAQLLL EKEVVDRQDL
DMFLSAKVTP MPPPKPVANI EESTATGKPD QKTQGT
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