Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5307 |
Symbol | |
ID | 8007804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 198860 |
End bp | 199483 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644822517 |
Product | LemA family protein |
Protein accession | YP_002973777 |
Protein GI | 241114302 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.271744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGCAG CATGGTCAGT CGTTGTTGCG GTAATTTTGG CAATCAGCCT CTCGGGGTGC GGCTATAACA CCATTCAAGC GCAGGATGAA CAGGTCAAGG CAGGCTGGTC TGAAGTCGTG AACCAATACC AGCGGCGCGC CGACCTGGTA CCGAACCTGG TCAACACGGT CAAGGGTTAC GCAAGTCATG AGAAAGAGGT GTTGACGGAG GTGACTGAGG CTCGCGCGCG TGTCGGCGCC ATCCAAGCCT CGCCTGCGTT GCTCAATGAT CCGCAGGCGT TTGCCCGATT CCAGTCGGCG CAGCAGCAGT TGACCGGATC GCTGTCCCGA CTCCTTGCCG TGTCGGAGAA CTACCCGCAG TTGAAGGCAG ATGCTGGGTT TCGCGATCTG CAAGCACAGC TTGAGGGGAC CGAGAACCGG ATCACCATTG CACGAAATCG GTACATCCAA TCGGTACAGA GCTACAACGT GACCGTGCGC TCATTTCCAT CGAATCTGAC CGCGAAGGCC TTCGGCTATC AGGAGAAGCC CAATTTCACC GTTGCCAACG AGACGGCCAT TGCCAAGCCG CCCCAGGTGG AATTCGGTTC GCCGTCCGCC AGTGCGCCGG GGAGCTCCAA GTGA
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Protein sequence | MRAAWSVVVA VILAISLSGC GYNTIQAQDE QVKAGWSEVV NQYQRRADLV PNLVNTVKGY ASHEKEVLTE VTEARARVGA IQASPALLND PQAFARFQSA QQQLTGSLSR LLAVSENYPQ LKADAGFRDL QAQLEGTENR ITIARNRYIQ SVQSYNVTVR SFPSNLTAKA FGYQEKPNFT VANETAIAKP PQVEFGSPSA SAPGSSK
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