Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5301 |
Symbol | |
ID | 8007798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 190475 |
End bp | 191248 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822511 |
Product | hypothetical protein |
Protein accession | YP_002973771 |
Protein GI | 241114296 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.457246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGCA AGGCCATTCC CTCTCTGGTG TCCGCGTGCC TTGTGGCGTT TGCTGCCGCA TGCATGGTGG GTGGGGCTTG GGCTGAGGAA CCAGACGGCC GCACGCTCGT CGATCGCGTC GATACCCTGC TGTGGGGCAA GACGCTGCAA GGCGAGTTCC AGATGACGAT CACCACACCG CGCTGGCAGC GCGCGCTTGA CCTGCGCGCC TGGATGGAGC GGCCGCGGCG CTCGTTCATC CGCGTTCTGG CGCCGGCCAA GGAGGCCGGT ATTGGGTCGC TGCGTATCGG CTCGGAGATG TGGAACTACC TGCCCAACAT CGAGCGCACC ATCAAGATTC CGCCGTCGAT GATGCTGCAG CCCTGGATGG GCTCCGACTT CACCAACGAC GACTTGGTCA AGCAAAGCAG CGCCGTGGAT GACTACACGC ATCGGGTTCT CCGCACGGAG GTGCTGAACG GCGCCGCGTC TTACGTGATT GAATCGATTC CCAAGCCGGA TGCCGCCGTC GTGTGGGGAA AGATTCTCTA CTGGATTCGG CAAGCGGATA CGATTCCGCT CAAGCAGTAT TACTACAACG AGCGCAACGA ACTGGTGCGG GTCCTGACGT TCTCCGACGT TGGCCCGATG GGTGGCCGCA CCATTCCGAC CAAATGGGAA ATGCGCCCCG TGAATGATCC AGGCCACGCA ACCGTGATCG TCGTCAAGGC CGCGCGCTAC GACCAGCCGA TTGACGACGA ACGCTTTACG CAGCGCAATC TGCAAAAGCC ATGA
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Protein sequence | MVRKAIPSLV SACLVAFAAA CMVGGAWAEE PDGRTLVDRV DTLLWGKTLQ GEFQMTITTP RWQRALDLRA WMERPRRSFI RVLAPAKEAG IGSLRIGSEM WNYLPNIERT IKIPPSMMLQ PWMGSDFTND DLVKQSSAVD DYTHRVLRTE VLNGAASYVI ESIPKPDAAV VWGKILYWIR QADTIPLKQY YYNERNELVR VLTFSDVGPM GGRTIPTKWE MRPVNDPGHA TVIVVKAARY DQPIDDERFT QRNLQKP
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