| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5281 |
|---|
| Symbol | |
|---|
| ID | 8007986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | - |
|---|
| Start bp | 167926 |
|---|
| End bp | 168888 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644822491 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002973751 |
|---|
| Protein GI | 241114276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATA TCGACAGGTA TCTGCAGGCA GCGACCCGCG ATCACACACG GCGCAGCTAT
CAGTCCGCCA TCCGTCATTT CGAGCAAGAG TGGGGTGGCT TCCTGCCGGC CAGCGCCGAC
AGCGTTGCAC GCTATCTGGC TGAGCACGCA CAGACGCTTT CCATCAACAC GCTGCGCCAA
CGGTTGGCTG CGATCGCGCA GTGGCACGTT TCGCAGGGCT TTCCCGACCC CACGCGAGCA
CCGCACGTCC GCAAGGTGCT CAAGGGCATC CAGGCACTGC ACCCCGCGCA GGAGCGGCGC
GCCAAGCCAT TGCAGCTCGC CCAGTTGGAG CAACTGGTTG CCTCGCTGGA TGCGCAGATC
GCGACCGCCT CGTCTGAGGG CAACGCCCAT CAACTCCAGG TGCATACCCG CAACAAGGCG
CTGGTGCTGA TCGGCTTCTG GCGGGGCTTC CGGTCGGACG AACTGAGTCG GCTGCAGATC
GAGCACATCA CGGTGGAGCC CGGCCGGGGC ATGACGATTT TCCTGCCGCG CACCAAGACG
GACCGCAACC ATGTCGGTAC GACCCACAAG GCGCCCGCGT TGTCGCGCTT GTGCCCAGTC
GCCGCCTACG AGGCCTGGTT GGCGGCGTCC GGCCTGACCG AGGGCCCCGC GTTCCGCAGG
ATTGACCGCT GGAGCCGAAT CGCAGCCGAT GGACTGCAGG CCAGCAGCAT CGTGCCTTTG
TTGCGCGCGC TGCTCCATCG CGCAGGACTG CCGCAATCGG ACCGCTACAG CAGCCACTCA
CTACGACGGG GCTTTGCAAC CTGGGCGAAC TCGAACCAGT GGGATCTCAA GATGCTGATG
GAATACGTCG GCTGGAAGGA CGTACGCTCG GCCATGCGCT ATATCGACGC GGCCGACCCA
TTTGCCCAGC ATCGGATCGA AACAGCGCTG TCGGTCGCAC CCCGGCCGGG CATTGCAGTC
TGA
|
|---|
| Protein sequence | MADIDRYLQA ATRDHTRRSY QSAIRHFEQE WGGFLPASAD SVARYLAEHA QTLSINTLRQ
RLAAIAQWHV SQGFPDPTRA PHVRKVLKGI QALHPAQERR AKPLQLAQLE QLVASLDAQI
ATASSEGNAH QLQVHTRNKA LVLIGFWRGF RSDELSRLQI EHITVEPGRG MTIFLPRTKT
DRNHVGTTHK APALSRLCPV AAYEAWLAAS GLTEGPAFRR IDRWSRIAAD GLQASSIVPL
LRALLHRAGL PQSDRYSSHS LRRGFATWAN SNQWDLKMLM EYVGWKDVRS AMRYIDAADP
FAQHRIETAL SVAPRPGIAV
|
|---|
| |