| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5280 |
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| Symbol | |
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| ID | 8007985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 164893 |
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| End bp | 167826 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644822490 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_002973750 |
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| Protein GI | 241114275 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGCT TGGAATTTCG CTATGTGGGA AGAGACTCCC TACCCACGCG TCTGCCGGAG
TTCGACGTCG AGCATTACTT CGCGTTGACC GCTAGCGATG TCGCCGCGAT CAACCAGAAG
TTCCGACGCG CCAGCCGCCC TGGAGTCGCC ATTCAGTTGG TCTTTCTGCG CGCCAGCGGC
CGTACGCTGG ACCAACTCAA CACACTCCCC CGTCAGTTGC TGCGCTATAT CGGCGAAAAA
CTCGCCGTCG AGACACCAAC GATCGCCTCG CTGCGCACCA TTTACCAGCG ATACCCGACG
CTGTATGAGC ATCAGGTCTG GGCCCTCCAA TATCTGGGCC TGACACGCCT CGATGACGAG
CAATGGGCCG GACTCGAAGC CTGGATGCGT CAGGACGCCG CCGAATCGCT GACCGTTGAG
GAACTGCTTC AGCACGCGCA CTACTGGTTG TACGAACGGC GCATTCTGAT CCCGTCGACG
CGTGCGCTGC AGGATCTGGC CCGCTCCATC TGGGCGGGCA TCGAGCGGGA TCTGCTGGCC
ATGATCGACG TGGTGGTCTC GCGCGAGCAG ATCCTGCGGG CCGAGGCTGC GGTGTTTGCC
CAGCACGCCA CATCGGGCAC GACGGTGCTG GAATGGCTCA AGACCCCACC CGCGCGCCAC
AGCCCGTCAA CGATGACCGA GATGCTGGCC AAGATCAGCT TCTTGAAGGA CCTCGGCGCG
CATACCTGGA CATTTGACGC GGTCCCCATC GAGAAACAGC GGGCCTACGG CCAACGTATC
CAGGCCCGCC GTCCCGCCAA AATCCGCGAA CTCAAAGCGT CGACGCGCAC GCTCGAACTG
GTGTTCTTCC TGCGTGTCAC CTTGCTGGAG TTGACTGACG CCATGGTGTA CCAAAGCGGG
CGCCGTATCT CAGACCTGGT CCGGCAGGCG TACAACAAGA CCACGACGAA GCAAGCCCGC
TCGGCGATCG AATACCGGCA GCAACTGGTG GAGATCAAGG CCCTGGTGGA CGATACCCGC
CGCTCGGCCG AGGACCGACT GGCCGACATC GGCAAGCTGC TTAAGGGTCT GTCCAGTCGG
CCGCCGGCAA GTCACGCCGC AAGCGTGCGC GAAACCCTTA CCGAAGACCA CCACCGACTC
CGCAACCTCC TGACACCCTT GCGGGCGTTG GAATTCGCCA GTCACGGTAA CGATCCTGCC
ATGCGCCAAC TCGATCTCGT TGGCGGTTTG CACGATCGGG GCATGACGGA GTTGCCGCCA
GACTGCAATG TGCCAGTGAG CGCCAGTTGG CGCGACCTGG TCGACGGTGA GGACCGCCAG
CGCGCGCTGC GTGCCTTGGA GGCCTCTGCT GTAATGAGTT TGCGCAAGGG GCTGCGCCGC
GGCACGGTGT GGATCAACCA TAGCCTGTCG TTTCGAGAAC GAGACCAGTT GCTGATTCCG
CCGGCACAGT GGGAGGTCGA CCGCGACCGG CATCTGTCTT CGCTCGGCCT GCCAAGCCAA
GCGAGGCTCT ATCTTGATCG CCTGACCGAG CATTTGAAGG CGGGTCTCGC TGCGCTGGAC
GAGGCCCGTG AGGCTGGCCA CTTTACGATC GACGCGGACG GCATCCTGCA TTTGTCGCCA
TTGGAAGCGC AGACCACGGA TACCACGCCT CAACGCACCC GAGATCTGCT GTTCAAGGAC
ATCGGCAGCG CACAGTTTGC CGACATGATT CTGGAGATGG ATGCGCGCAC CAATTTCAGT
GAAGTGCTGT TGGCGCGCAA GGCGCGGGAT GCCCACGAAC TCGTCTCCCT TTATGCAGCC
CTGATCGCGC ACGGCACCGA ACTGGATGCC AAGGGCGTCG CGGCGATGAT CCCGCAGTTG
GACCTCGCGC ACGTCTCCAC CGCGATGCGC TCCCTGGAAA TGCCCGGCCG GCTGCGCCGC
GCCAACGAAC GTGTGGTGGA GTTCCAGCGC ACGCACCCGA TCACCGATCT ATGGGGCACC
GGCCAACTCG CCTCCAGCGA CTCCATGAGC CTGGACACGT CCCCACATCT GTTCTACGCG
CGCGCTGATC CCCGCCGACG CACGCACGCC GCTGGCGTCT ATACGCACGT GCTGGATCAG
CATGGGATCG TCTACAACCA GCCGATGGTG CTCAACGAGC GCCAAACTGG CGCGGCGATC
GAAGGCGTCA TGCGTCACAA CGAAACCCGC GCTGACGGTG GGCTGCTGCG GCTCGCCGTC
GACACCCATG GCTACACGAA CGTGGGGATG GCGGTGGCCA AGCTACTTGG CTTTGACCTC
TGTCCCTGGC TGCGCAACCT GTCGGAGCGC AAGCTGTACC TGCCGCGTGC CCTGTCGGTG
ACGGAGGGAT TGTCGGCTGC CGTGTCGCAC GAGGTCTCCC TCAAGGCGAT CCGCGACGGC
TGGGATGGCT TGCTACGCCT GGTGGCGTCC ATTCACGCGG GGCGCGTGAG CGCGATCGTT
GCGCTGCAAC GCTTCGGCAG TGCTGCCCAG GGTGACCCGA TCCACCGGGC AGCGGATCAC
CTGGGCAAGC TGCTGCGCAC GCTGTTCCTA TGCGACTTTT TCAGCAACAT CGAGTTTCGT
CGCGAGTTGC GCACGCTCCT CAATCGGGGT GAATCCGTGC ACCATCTCCA GCGGGCGATT
TATATGAGTA AGGTCCAACA CGAGCGCGGT CGCCGCCAGG ACGAGATGAT CGCGATTTCC
GGGGCGCTCT CGCTGCTGAC CAATCTGGTG ATTGCCTGGA ATACCGAGCG GATGCAAACG
ACGGTGGATA CGTGGCAGCG CAAGGGGCAA CGGATCGACG ATGACTGGCT GCGCCGCATG
GGGCCGGCAC ACTTCGCCCA TGTGAATTTC CGGGGCGTTT TGAGCTTCAA GATCCACCAA
TTTCAGGATG CCCTGTTGGA GGCGGCACCT CGCCGGCGTG CGAGCCAAGC ATGA
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| Protein sequence | MPGLEFRYVG RDSLPTRLPE FDVEHYFALT ASDVAAINQK FRRASRPGVA IQLVFLRASG
RTLDQLNTLP RQLLRYIGEK LAVETPTIAS LRTIYQRYPT LYEHQVWALQ YLGLTRLDDE
QWAGLEAWMR QDAAESLTVE ELLQHAHYWL YERRILIPST RALQDLARSI WAGIERDLLA
MIDVVVSREQ ILRAEAAVFA QHATSGTTVL EWLKTPPARH SPSTMTEMLA KISFLKDLGA
HTWTFDAVPI EKQRAYGQRI QARRPAKIRE LKASTRTLEL VFFLRVTLLE LTDAMVYQSG
RRISDLVRQA YNKTTTKQAR SAIEYRQQLV EIKALVDDTR RSAEDRLADI GKLLKGLSSR
PPASHAASVR ETLTEDHHRL RNLLTPLRAL EFASHGNDPA MRQLDLVGGL HDRGMTELPP
DCNVPVSASW RDLVDGEDRQ RALRALEASA VMSLRKGLRR GTVWINHSLS FRERDQLLIP
PAQWEVDRDR HLSSLGLPSQ ARLYLDRLTE HLKAGLAALD EAREAGHFTI DADGILHLSP
LEAQTTDTTP QRTRDLLFKD IGSAQFADMI LEMDARTNFS EVLLARKARD AHELVSLYAA
LIAHGTELDA KGVAAMIPQL DLAHVSTAMR SLEMPGRLRR ANERVVEFQR THPITDLWGT
GQLASSDSMS LDTSPHLFYA RADPRRRTHA AGVYTHVLDQ HGIVYNQPMV LNERQTGAAI
EGVMRHNETR ADGGLLRLAV DTHGYTNVGM AVAKLLGFDL CPWLRNLSER KLYLPRALSV
TEGLSAAVSH EVSLKAIRDG WDGLLRLVAS IHAGRVSAIV ALQRFGSAAQ GDPIHRAADH
LGKLLRTLFL CDFFSNIEFR RELRTLLNRG ESVHHLQRAI YMSKVQHERG RRQDEMIAIS
GALSLLTNLV IAWNTERMQT TVDTWQRKGQ RIDDDWLRRM GPAHFAHVNF RGVLSFKIHQ
FQDALLEAAP RRRASQA
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