Gene Rpic12D_5277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5277 
Symbol 
ID8007982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp161579 
End bp162091 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content62% 
IMG OID644822487 
Producthypothetical protein 
Protein accessionYP_002973747 
Protein GI241114272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.576261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCT ATCCCGCAGG TTCCCAGTGG ACCCGTTGCT TTGAAGCCGA TCTGCCGGCC 
TCCGAGTTGG CCGCGCGGTT GGTGGGCAAG CACGAATTCA CTCGTGCGAT GCTGTTCCAG
CCGTTCGGTC ATGGTCGTGG CGCGGTGATC GCCACGCGCG GCCACATGCT CGTCATGGCT
GTCGAAACGG ACGGTGAGCG CACGGTTTTT ACCGTGGCGC CCACGGTCCA GGTGCAGAAC
CTTCTGTGGT CCCTCTCCAA CGGCTACACC AGCCAGTGGA GTGAGGCTGA ACTCAAGGCC
TTGACCGCAT GCACCACCTT TCCGGAGGTG CTTGACCTGG CACGGACGCA ATTTTTCGCG
GCCGTGCGTT CGTTCGAGCG CGCACTAGCC GGCAAGCCGG AAGTCGACGT CGTCGTCACG
TATGACGACT CGCGTGAGGT GCTGGAGATC CCCGGCGACT ACTACATGAC TGGCTTCAGC
GGTGAGGGGG CACCATGCGA CCTCTCAAAC TGA
 
Protein sequence
MILYPAGSQW TRCFEADLPA SELAARLVGK HEFTRAMLFQ PFGHGRGAVI ATRGHMLVMA 
VETDGERTVF TVAPTVQVQN LLWSLSNGYT SQWSEAELKA LTACTTFPEV LDLARTQFFA
AVRSFERALA GKPEVDVVVT YDDSREVLEI PGDYYMTGFS GEGAPCDLSN