Gene Rpic12D_5263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5263 
Symbol 
ID8007968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp150986 
End bp151909 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content60% 
IMG OID644822473 
Producthypothetical protein 
Protein accessionYP_002973733 
Protein GI241114258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.684405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TCAACGTTCA CGAGCGTGTC ATGCTCGCAT CCCTTGGCAT CTCCGTTTGG 
CGCGCACGTC GCTTCGATAC CCGCGCCACG GAAGAGGTGG AAAAGAACCA CGCCACCAAA
GACATCGGGC GCTTCAACAA GAAGCTCCTG ACCGACGATG CCATTTCTTA CAAGAGCGTG
TGCAGCATCG CCACGCAAGC ACGTGCCTTC TTCAATGCGC ACACCCTCGA ATACGACCAG
CTTGGCGTGC GTTTGCTGCC CACGGCTGTT TACCTAAAGG TCGCTGACCG GCTGCGCGAG
TTTCAAGACG AGTTCCGTGA AGCCACGTCA GCCTTTCTCG CCGAATACCC AGCGTTGAAG
GAGCAGGCCA AGGGTGCTCT CAACGGGCTC TATACCGAGG CGGACTACCC GACCCTCGAA
GCGCTGTCGA CCAAGTTCGG TATACGCCTG TCTCCCTTGC CGTTTCCGGA CGCAAGCCAG
TTCGGCATCA ACTTGCCGGC CAACGTGCTG GACGGCATCA AGGCGGATAT GGACGAGCGG
GTGTTCAGCG CGGTCAAGAC GGCCAACGAA GACATCGTCG GCCGCCTCTA CGACGCTGTG
CAGCACTTCG CCAACCGTCT GTACGCGGGA CGCAACGTCC GGCTGGGCGT TGTCGACAAG
GTGCGCGAAC TGTGTGACCT GCTTCCGACG TTGAACTTCA CACAGGATCC GGCATTGACG
GACATCCTGA ACGAGACGCG CAATCACCTG GCTTGCTACA CGGGCGCCGA ATTGAAGGAT
TCGGCCGATC TTCGCCAGAA GGTGGCGGAG AAGGCGATGG AGATCGAGGC GCAGATGGCG
GTGTACATGA CCGGCGCGCT CAGCACGCCG GCAGCACCGG CACTTGGCGA TTCGTCTGCG
CTCAGTTTCC TCCTTGCCTC GTGA
 
Protein sequence
MNILNVHERV MLASLGISVW RARRFDTRAT EEVEKNHATK DIGRFNKKLL TDDAISYKSV 
CSIATQARAF FNAHTLEYDQ LGVRLLPTAV YLKVADRLRE FQDEFREATS AFLAEYPALK
EQAKGALNGL YTEADYPTLE ALSTKFGIRL SPLPFPDASQ FGINLPANVL DGIKADMDER
VFSAVKTANE DIVGRLYDAV QHFANRLYAG RNVRLGVVDK VRELCDLLPT LNFTQDPALT
DILNETRNHL ACYTGAELKD SADLRQKVAE KAMEIEAQMA VYMTGALSTP AAPALGDSSA
LSFLLAS