Gene Rpic12D_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5242 
Symbol 
ID8007947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp136541 
End bp137263 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID644822453 
Producthypothetical protein 
Protein accessionYP_002973713 
Protein GI241114238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.464442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TCTTGACCGC CAGTCGGTCT CATGACGTGG CCCTGCAAGG GGCCATTTTG 
CTGTATGGGC CGGCCGAGGG GCAGTTCACA TACTCGACGG CACACCGCAT CACTCACGAG
GCGGGGACTC GAAAGCCTGC AATCGGCCCG GGTGTTCCGC TCAATCGGCG AGCACTCATT
CACGCTGTGA CCCAGGTTGC TTTGTCAGCG TTGCCGAAGG GCGAGTTCCT GACGCCGAAC
GTACTGTCCG TGAGCACGCG CGCCGTAACG TGGTGGTGCC CGCCGGCGAT TCGCCGGGTG
TTCTTTCAAT GCAAAGAATT GGGTACGCGC AGTGCGGTAG TGCCGCACCC GGGCTTGGTG
TTCCAGGCGG CCAATGACGG GTTCAGCGTG TTTGCCTTGA TGGAGGACGT CAGGCCGACG
CCGGAATCCA TGCTGCACGA GCCGCCGTAC TTCAATACGT GGGACGTGGG AAGGATTTGC
ATCGGCTCTG CGCAGGTTCC GAAGCAGATC GATGTCGCTT CGATTGCCGG TTGGGAAGAA
GCCTTCTTCT CGTCGGCCTT CACGCATCCA AACCGCGGCG CCCAACGCGT CAAGTTCGAA
AGAGGTGTGT ACGCCTTCTG GAAGGAGATG CTCGATGGCA ACTTTGCCGA GTACCCGAAG
GAAGTGCTCA TTCCGTTGAA GAAATCGCTC GGTGATCTCA TCGCCGGCAA AGTTGGAGGT
TGA
 
Protein sequence
MAKILTASRS HDVALQGAIL LYGPAEGQFT YSTAHRITHE AGTRKPAIGP GVPLNRRALI 
HAVTQVALSA LPKGEFLTPN VLSVSTRAVT WWCPPAIRRV FFQCKELGTR SAVVPHPGLV
FQAANDGFSV FALMEDVRPT PESMLHEPPY FNTWDVGRIC IGSAQVPKQI DVASIAGWEE
AFFSSAFTHP NRGAQRVKFE RGVYAFWKEM LDGNFAEYPK EVLIPLKKSL GDLIAGKVGG