Gene Rpic12D_5235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5235 
Symbol 
ID8007940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp130464 
End bp130952 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID644822446 
Producthypothetical protein 
Protein accessionYP_002973706 
Protein GI241114231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.223315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.63205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGAAG TTGAAATAGG CGGCCGCCCA AAGGCCGAAC CCTGCTCCCA GTTTGGGGAG 
GCTGAAGACC AGGCACTGGC CAGCATTGAG GCGCAGGCCT TCGCGCGCAT GCTGGATCGC
GTCTTCTGGT TCCCGGAGCC GCATGTGCTG CGGTTCGAGG CGCGCGTGCA TTCGGATTCG
CAAGGCATAC ACCACACTGT GGTGGGGGTT GTTGGGCACG GCGGCGAAGC GTGGTTCAGC
GAGGACCTCA TTCCAGCTCG TTGGGACTAT GTGGCGTTCA AGGAGATTGG CTGGAGCGTC
TCCAAGCTAC TACGCAACAA GCTCATCGCT GACGGCGTGC TTCGTGAGGA CGCACCGGGC
CTGCTGGCGG GGTTGATGCC AGACTTCTCA GGGATGCAAG AACCAGAGGA GAAGGACCAC
TATCGCTGGG CCGTCGTCAA TCGCTTGCGG AGCGCTGCAA TGACGCGGCC GATGCCAGGA
AGGTGGTAG
 
Protein sequence
MREVEIGGRP KAEPCSQFGE AEDQALASIE AQAFARMLDR VFWFPEPHVL RFEARVHSDS 
QGIHHTVVGV VGHGGEAWFS EDLIPARWDY VAFKEIGWSV SKLLRNKLIA DGVLREDAPG
LLAGLMPDFS GMQEPEEKDH YRWAVVNRLR SAAMTRPMPG RW