Gene Rpic12D_5232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5232 
Symbol 
ID8007937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp127163 
End bp128383 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID644822443 
Producthypothetical protein 
Protein accessionYP_002973703 
Protein GI241114228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.500943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.262246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA TCCGGATCGG CCCGTCCGAC TTCGACCTTG CTGAGGTGCT GGAGAACCCG 
GGCCGCTACA CAACCCAGCT CGAGCGCGCC AAGCGAATTC AAGGGTTCGC CGAGTGCGGC
TGCACAGAGC ATGCCCCTCG GCCGAAGCTC GTCATCCGGC GCCTCCGGTC GGCGTTCATC
CTGGCGCGCT GGCCAGATGC CAACTACAAG CATCGTCAGG GGTGCCCGTT TCAGGAACGC
AAAGGCCACG CCACGGCGAC GGCAAGAACC AAGGGCCCAT TCCAAACCCG GAACGGCAAG
CACCTCATTC AGCTTGATCT GTCCTTGGAG GTTACACAGC CCGGCACCGG CCAGCCTGGC
CCGCGATCAC CCCAGGCCTC CAGTGCGCCG CGAGCGCATC GCCGATCGGC ACCTCTCCTC
GCATTTCTCG AATACGCCTG GGAGGCGGCT GGATTGCACG CGTGGGCCGA TCAGGGATAC
CGCGGTTGGA ATGCATGCTG GTCCATGCTC AGTGCCGAGT TCGCCGACGC GAAAATCAAC
GGCCGCCCGG CAGCCGATGT GCTGCACATC ATGCGCAGGT GGGACCCGGA ACATAAGGCC
GAGATCCTTG CCGAGTTCGA TGCATTCGTC GCGCGGCTGA CCACTGCTGG CACCACGACG
CACCGGGGGC TGATCATCGG CGAGGTCGGC GAGTTCAAAC CGAGCGCTCA CGGCGGCATG
CTGGTGCTGC GCCAAAGCCA CCAGCGGTAT TTCATGTCCA ATGCGCTGTT TCAGAAGGTC
TCACGCTCCT ACGCGACTGC GCTGGCCGGT CTCGGCCGCA AGGATTTGCG GAGCGTGGCG
GTCCTGGCCG TCGAGAAGAC CGCCAATGGC TACTTGCACG TCGCCGACAT GGCAGCCATG
TTGACCAACT CGTCCTTCCT GCCATGCGAC TCGTCGCACG AGGCAGTCAT GGCCGACCAC
CTGATTCGCC TGCAGCGCAG GTTCGAGAAG CCACTGCGCC ATGTGGGCGC CGCCGCAGTC
CACCCGGACT TCGAGGTAAA GGATGTCGAC CAGCGCACCG TTATCGAAGT GCTCGGCATG
ACCGGCAACC GCGAGTACGA CCGGCGGATG CAGGAAAAGC GCGAGTACTA CGCGACCAAC
GGTATCCGGT TGGTCGAATG GAACCCGAAC AAACACCCCG TAGCGGACAC CCGCCTCCCG
CCGACACATC GAGACCGGTG A
 
Protein sequence
MIKIRIGPSD FDLAEVLENP GRYTTQLERA KRIQGFAECG CTEHAPRPKL VIRRLRSAFI 
LARWPDANYK HRQGCPFQER KGHATATART KGPFQTRNGK HLIQLDLSLE VTQPGTGQPG
PRSPQASSAP RAHRRSAPLL AFLEYAWEAA GLHAWADQGY RGWNACWSML SAEFADAKIN
GRPAADVLHI MRRWDPEHKA EILAEFDAFV ARLTTAGTTT HRGLIIGEVG EFKPSAHGGM
LVLRQSHQRY FMSNALFQKV SRSYATALAG LGRKDLRSVA VLAVEKTANG YLHVADMAAM
LTNSSFLPCD SSHEAVMADH LIRLQRRFEK PLRHVGAAAV HPDFEVKDVD QRTVIEVLGM
TGNREYDRRM QEKREYYATN GIRLVEWNPN KHPVADTRLP PTHRDR