Gene Rpic12D_5227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5227 
Symbol 
ID8007932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp121798 
End bp122661 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID644822438 
Producthypothetical protein 
Protein accessionYP_002973698 
Protein GI241114223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.180964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGA CGAATGAGAA CGCTTCCCCG GCAACAACTC AACACGAAGC CATGACGCTG 
CTTGCCGACC TCGTTCTTTC AGTGCAATGG TGGGCGGGCC AGGAAGACGG CATTCCGGAT
ACCGTCCGCC CCGCCTTTGA CCGGGCTCAG AAGGCTCTTG GCTGGCCACA AGGGGAATCG
ACCACCACGC CGGCGGCAAC GGCAATGCCC GAGGCGCCAT GTGCGAGTTG CCACGGCTTC
GGTAGCGAGC TGACGGTGTA CAAAGGCAAG GTTCCCTGCC GGGCATGCCA GAAATCCAAC
AATGCCGCGC CATGGCTACC TCCCGGCTGG GAAATCAGTG TGGCCGATGA CGACGGCTCC
ACCTGGGTGA CACTGCGCCG CTGCACTTCG GATCGCAAGG TGCTCGCCCA GTCGGTCTAC
GCGCACAAGC GGGGATCTCT GGATTCGCAT GTTTGGCATG CACTGCGCCA TTCTCTCGAC
ATCACGCGCC CTCAGATCGC AGAGCTCGAC CACTGGCGAG CCCGGGCACT GAATGCAGAG
CAACTGCTCA ACAGCCCCGA GCTGCATGAC TTTGCCCGCG GGGTCGTGCA AGAAGCCGCC
CACCAGCGCC AGCGTTGGGG AACTGCCAAG GACGCCGACA AGTCGCCAGC GGACTGGGTC
TTTCTCGTTG GCCACCTCGA AACCCGCTCC ATGATGTACC TGCAGGCCGG CAACGTTGAC
AAGGCGCTGC ATCACACGAT CACGACCGCT GCGGCACTCG CCAACTGGCA CACGAACATT
TCCGGAGCGG ATAGCAGCAT GTGGCCCAGC CTTCCCGGCC AGCCACATGC CAGCGCCCCG
GTGGGCGGCG GCGGCCATGC GTGA
 
Protein sequence
MQQTNENASP ATTQHEAMTL LADLVLSVQW WAGQEDGIPD TVRPAFDRAQ KALGWPQGES 
TTTPAATAMP EAPCASCHGF GSELTVYKGK VPCRACQKSN NAAPWLPPGW EISVADDDGS
TWVTLRRCTS DRKVLAQSVY AHKRGSLDSH VWHALRHSLD ITRPQIAELD HWRARALNAE
QLLNSPELHD FARGVVQEAA HQRQRWGTAK DADKSPADWV FLVGHLETRS MMYLQAGNVD
KALHHTITTA AALANWHTNI SGADSSMWPS LPGQPHASAP VGGGGHA