Gene Rpic12D_5210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5210 
Symbol 
ID8007915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp106954 
End bp108135 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content60% 
IMG OID644822421 
Producthypothetical protein 
Protein accessionYP_002973681 
Protein GI241114206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTT CGACTGCTCT TTCTGCCAAA GACTCGCTCA TCCTTCCCGA CCGGATTACC 
GACCGGATCC GTTCCATCAA CTACCAGCTT GCGGATTTCA TGGGCACCTG CATGCTTCGG
CACCGGGAAG TGGCGCCAGT ATTTGGAGTG CGGCCGGAAG AGCTGGCCAT GCTCGCGCAG
AACGCTGCAG GGCAGCGGCA GTTGATGGGA ACACCGTTCC TGGTCGTGAC ACCGATGTTC
AAGAACGTCG AAGATTGGCG CAGCCTCATC AAGAAGACGA CACCAACCCT GGCCATTGAC
AAGGTGAAGG CGGAATTCGG CAACCTTGAT CCCAGCCTGA AGATGAGCTT GTTCCACCAG
AACAAGGATT ACGTCTGGAT GGTAGTCGAC CTACTCCACT CCACGCCCGT TGCCGCTCAA
CTGCTGGGCA TGCCGCAAGA CCTGGCTGAC TATCTCGTGA CCGTGTCTCA GCACGAGCTG
GAGCTTGCCA TCTTCGGCGC CAACTTCCCG ATGTTCCGTT GGCGTTTTGA GAATCCGATG
TTCTGGCTTG AGTATTCGGC CAACCTCATC TCGGAAGAGA CGATCTGCCA CCACGTGATG
AACGCCGGCG ACTCACGTGC CCCGCGGCCC CTGCAACGTG AACGCTGGGG AAATTTCCGC
GTCGGCCGCG CGCAGATGGA ACGCTATACC GAGGCGCTCA TTGGCCTGCG TTGCCGCGCA
TCCAGCGTGG CCTCGATGTT CCCTGGCACC GCGGCTACGG CGCGCGCTCT CTATCGACAA
ATCCACGGCG AATCGTCTCC CTGCGGCCTG ATGCCCTCCT CGTCATCCTG GTACGTGGAG
TCGGTGTCGA GCCGCATTCA GTCGACGACG CTGATTTGGC TGTACTGGAG CGCCCTTGCC
GCACGTGCGA ACGAGCCAGA GGCGTTCATC ACCGCACTCG ACACCGTCGG GCGTCTGTTC
GGCGATGCCG CGCGGCTGAC CCCGGACCGG GCGTTCCATT TGGCCCGATC AGTGTCCACC
GGCAGCGATT TGTCCATGTC CAGTTGCCGC ACCTGTTCCA CGCACTATCT GACGTGCAAT
ACCACGCCAA AAATCGAACT GGCGGCGTCC TTCTATTGCC CGTCATGCAC AGGTGCGTTG
ACGGCGCCAC GCAAGGGCAA ACCGCGCAAA CAACTCGCAT AG
 
Protein sequence
MTRSTALSAK DSLILPDRIT DRIRSINYQL ADFMGTCMLR HREVAPVFGV RPEELAMLAQ 
NAAGQRQLMG TPFLVVTPMF KNVEDWRSLI KKTTPTLAID KVKAEFGNLD PSLKMSLFHQ
NKDYVWMVVD LLHSTPVAAQ LLGMPQDLAD YLVTVSQHEL ELAIFGANFP MFRWRFENPM
FWLEYSANLI SEETICHHVM NAGDSRAPRP LQRERWGNFR VGRAQMERYT EALIGLRCRA
SSVASMFPGT AATARALYRQ IHGESSPCGL MPSSSSWYVE SVSSRIQSTT LIWLYWSALA
ARANEPEAFI TALDTVGRLF GDAARLTPDR AFHLARSVST GSDLSMSSCR TCSTHYLTCN
TTPKIELAAS FYCPSCTGAL TAPRKGKPRK QLA