| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5202 |
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| Symbol | |
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| ID | 8007704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 100580 |
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| End bp | 101653 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644822413 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002973673 |
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| Protein GI | 241114198 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCC AGAAAGCTCT GCAGTGGCTG AAGGGCAATC CTCTGCCATG GAAGCTCCGA
AAACGCCTCT ATGAACGTGC GTCAACGCAT CTGGCGAACG ACGTAACGCT AGAGCGCGTG
CTTACCCGGT TCGGGGCCGG CTTGCTACGA CGGCGAAAAC GTCGCGCTGC TGCTGCAATC
GATGCCGTGA CACAAGGCGT CCGCAACGGC CAGACGCTGG CGGCGGCAAT GGACTCGTCG
CTCACCAATC TTGAGCGAAC CGTGCTCGAC GCTGGTGATC GAGCGGGCAA GCTTCCCGAG
GCAATGAAGC TCGTCATCGA GGTGCGCGAA CTGGTGGATC GCATCTTTTG GAAGCTGATC
CTCGGCTTCG CGCCGGCGCT TGTCTATGTC TACGCGCTCT ACAAGGTACT CGGCTTTATC
GGTGCCGACG TAGTGCCCGA GTTCGCAGGA ATCTTGCCGG CCGAGAAGTG GACCGGATGG
GCACGCGTCC TCTACCTGAT GGGCGTGTTT GCACAAAGCG CGGCAATGCC TTTGGCGACG
TACGGGCTGC TTACCTATGC GCTCTGGTGC GCATGGGCGT TACCGAACTG GGCTGGCCGT
GGGAGGGCGT TCTTTGATCG ATGGGTTTTT CCGTTCCCAC TCTATCGGGA GATCGCAGGG
TTCTCTTGGT TGCTGTCGTT TCTTGCTCTG CAGCGGGCGG GCATCCCTGA AGTGGAATCG
CTGGCCGCAC AGGTGCGCAC GGCATCGCCA TGGTTGGCGT CGCGGCTGCT CGCCATTTCA
TCCGGCACAC GCAATGGCTT TGATCTTGCA ACTTCCATGA TGCGGACTGG GCACGACTTC
CCTTCCGTGG ATCTGATCGA TGAGATCGGC GAGTACATGG GCAAAGCCGA CTCGTCGGAA
AAGCTGGCGA ACGTGGCGCG AGAGAACGCG GCCTATGTCG AGCGAAAGGT GCTTGCGATC
GGCGGTGGCA TGGCGTTGAC CCTGAGTCTT CTTGTGTACG CAGCCATGTT TGTCATGCAG
TTTGGCTCAA ACGCGCTTTC GTCGGCTCTC ACGTCGTCGA TGAGGCAGAT GTAA
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| Protein sequence | MNLQKALQWL KGNPLPWKLR KRLYERASTH LANDVTLERV LTRFGAGLLR RRKRRAAAAI
DAVTQGVRNG QTLAAAMDSS LTNLERTVLD AGDRAGKLPE AMKLVIEVRE LVDRIFWKLI
LGFAPALVYV YALYKVLGFI GADVVPEFAG ILPAEKWTGW ARVLYLMGVF AQSAAMPLAT
YGLLTYALWC AWALPNWAGR GRAFFDRWVF PFPLYREIAG FSWLLSFLAL QRAGIPEVES
LAAQVRTASP WLASRLLAIS SGTRNGFDLA TSMMRTGHDF PSVDLIDEIG EYMGKADSSE
KLANVARENA AYVERKVLAI GGGMALTLSL LVYAAMFVMQ FGSNALSSAL TSSMRQM
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