| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5194 |
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| Symbol | |
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| ID | 8007774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 92294 |
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| End bp | 93067 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644822405 |
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| Product | type IV secretory pathway, putative lytic transglycosylase; putative exported protein |
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| Protein accession | YP_002973665 |
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| Protein GI | 241114190 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.851054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCT GTGTGTCCGC GCACGCCGTG GTGGTCGATG CGGTGATTTC ACCGACGGCC
TACGTCGTGC GCGACGGTGG ACAGGTTCGG CTGCAGACGC TTCCGGGCAA GCCGGTCTTG
TACTGCGGCC TGGGCGCCTT CGAAACCTGG GCTCAGCGTT TGGTCGGCCA GGAGTTCCAG
ATCGGGTCCG CGCGACAGCC CGACGGAGTG ACTCATGCCG AGACGCTTGT CAGCGTTGTT
GCCGGTGCCG GGTGGCTGCG TCCCGCCTCG TTGGATGACG CGGGTCAAGC CGCCATCGTC
GAGCGCAAGG GCGGTTGGGC CTGCGCACCG AAAGCCGCCC CCTTTGCGGA ATTCAGTGAT
CGCGTCGATC CGACCATCCT GGCCGGCATT GCGCTGAACG AATCGTCGTA TCAGGGGCGA
CCATGGCCGT GGACGTTGAA CGTCGCGGGG CGTGGCTACT ACTTCGCCAC CCGAGACGAT
GCCTATGGTG CCATCCGCCG CCTGATCGAG GCGAAGCGGT GCGATTTCGA TGTCGGAATC
ATGCAGGTGA ACTGGTGCTA CCACGGCCAG CGCTTCGCAT CGCCCTGGGA TGCCCTGTCG
CCTGCATCGA ACATCCGTGT CGCGGAAACC ATCCTGCTCG AAAACCGGCA ACGCAGCGGC
TCTCCGATGA AGGCGGTCGC TTGGTATCAC AGCGCTGACC CCGCGCGTGG AGGGCCCTAC
TTCGCCCGAT TCCTGAACCA CCTGAAGCGG CTGGACTCCG CCAATAGCCC ATGA
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| Protein sequence | MAACVSAHAV VVDAVISPTA YVVRDGGQVR LQTLPGKPVL YCGLGAFETW AQRLVGQEFQ
IGSARQPDGV THAETLVSVV AGAGWLRPAS LDDAGQAAIV ERKGGWACAP KAAPFAEFSD
RVDPTILAGI ALNESSYQGR PWPWTLNVAG RGYYFATRDD AYGAIRRLIE AKRCDFDVGI
MQVNWCYHGQ RFASPWDALS PASNIRVAET ILLENRQRSG SPMKAVAWYH SADPARGGPY
FARFLNHLKR LDSANSP
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