| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5193 |
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| Symbol | |
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| ID | 8007773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 91063 |
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| End bp | 92274 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822404 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002973664 |
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| Protein GI | 241114189 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.261515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGC AGGTTGAGGA CGTGACCGAC GCTCGCGAGC GAGTCTCCAA GGGGAAGATC
CCCAAAGGGA TTATCTACGT CGCAGCAGGC ATTGCTGCGG TGCTGATCGG CACGCTTGCC
TTCTACTACC AGAGCAAAAC CGACGCCGAA GTGAAAGAGG CGTCGGAGGA GCAGCGCGCG
GAGAAGATGA AATCGCGGGC GACGGCGGGT GAGGCGTCGC AGAACCTCGG CCAGCAGATC
CGTGCCCAGC AGCAGGCCGC CAAGGATGAG GCGTCCCGCC AAGAGGCCTC TGCGGTAAGA
GCCGACTCCG GTCAGCGCGC ACCGGTCATG TCGGCGAAAG ACTTCACGAC GGGCCGTCAG
GGCACCGAGG TGATGGGGAA GAAGAATGAA GAGGACAGCA TCTTTACTGC GCCGCTCTAC
AAGGCAGGCA TGAACAAGGT GCGTGACAAC GCACGCCCGA AAGTCGACCT TCAAGGTACG
CTGGACCCTG CGTCCATGCG GGCGATGCAG CAGGCTGCCG CAGCGGCTGC CAACGCAACC
GGCGCACCGC CTGCTGATGC TGCGCCCGTC AACAGCGATC AACAGTTTCT GAAACAGACA
GCAGCAACGA AGTACGAGCG CACAGGTATT GCGGGCCGTT TGCCGAGTTG CACCGTATCC
CAGGGCTTTG TGATTCCAGC GACGTTTGTC GGCGGCAACA ACTCGGATAA GCCGGGCGAG
TTTCGCGCGA TGGTGTCGCA GAACGTATGG GACACGGTGG ATGGCACCTG CCTCGCGATT
CCGGCAGGTT CGATGCTGGT TGGGACTTAC AGCAGCGACA TCAGCATCGG GCAGGAGCGC
CTTCTCGTGG CGTTCACCCG TCTGCAGCTC CCCAATAAGA AGTGGGTTCC TCTCGGCTCG
ATGCAGGGTG CCGACACCAA TGGCTATTCC GGTGTGAGCG GGGACGTCAA CAACCATTTC
TTCAAGATCT TCTATGGCGC GGTTGTCATC GCCGTGCTGG AGCAACGCTT CAACAATCAG
CAGACGGCGA CGACCTCCAA TTCGAACGGC CTGACTACTT ACGGCAACGC GGCGGGCCAG
GTCGCCACAC AGACGGCGCA GACCATCCTG AACCGCAACC AGAACATTCG GCCGACCATC
ACCACGGAAC CTGCCCAGAA GCTGTTGGTA CAGGTCAAGC AAGACATCGT CCTGGAGCCG
TACCGTGAAT AG
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| Protein sequence | MAKQVEDVTD ARERVSKGKI PKGIIYVAAG IAAVLIGTLA FYYQSKTDAE VKEASEEQRA
EKMKSRATAG EASQNLGQQI RAQQQAAKDE ASRQEASAVR ADSGQRAPVM SAKDFTTGRQ
GTEVMGKKNE EDSIFTAPLY KAGMNKVRDN ARPKVDLQGT LDPASMRAMQ QAAAAAANAT
GAPPADAAPV NSDQQFLKQT AATKYERTGI AGRLPSCTVS QGFVIPATFV GGNNSDKPGE
FRAMVSQNVW DTVDGTCLAI PAGSMLVGTY SSDISIGQER LLVAFTRLQL PNKKWVPLGS
MQGADTNGYS GVSGDVNNHF FKIFYGAVVI AVLEQRFNNQ QTATTSNSNG LTTYGNAAGQ
VATQTAQTIL NRNQNIRPTI TTEPAQKLLV QVKQDIVLEP YRE
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