| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5190 |
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| Symbol | |
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| ID | 8007770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 87990 |
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| End bp | 89039 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822401 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002973661 |
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| Protein GI | 241114186 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0937857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA ATCATGACCC CTATTCCAAT CAGCTCACGC CGCTCGAAGA AAGCGCCGTG
AAGATGTTCT TTGAATCGCT CAAGCCGATT CAACCGGTGC TTGAAGAGGC GACCGTGGCC
GAAGTCATGA TCAATCACCA CAACAGCGTG TGGGTTGAAC GCAAGGGCCG ATTGGAGCGT
CTCGATCTCA TGCTGGAGCC CAAGAAGCTT GAAGGCGCAA TCCGCGCGCT GGCTTCGTCG
GTTGAGAAAT CGGCGGTCAA AGGCACCGAT CAAGGGATCA TCAACGCCGG CCATAAGGGG
CTGCGGATCG CCGCAGTCAT GCGCCCGACC GCAATCGACG GGCACGCCCT CAGCATTCGC
CGTCACCGTG AAAAGAACCT GACGCTCTCC GACTACACGG CGATGGGCGC GTTCTCTTCT
TCCGTCGCGC GCAACCCTGA CGACGATCAG ATCATCTTCC CGCCCGACGT CTCCGACGAC
GGGCTCGCGC ACGCGCTGTC GACCATGGTG CGGCAGCGCA AGAACGTGCT CGTCGCCGGT
GGCACATCGT CCGGCAAAAC CACCTTTCTC AACGCGCTCG TTGGCGAGAT TCCACACGAA
GAGCGAATCA TCTCCATCGA GGACACCCAG GAACTGAAGC TAAGCGTCCC GAACTGCGTT
CGTCTTCTTT CGAATCCCGA CAAGAAGGTC ACGACCCAGC AATTGGTCGC GCTGAGCCTG
CGTTTTCGTC CCGACCGTGT GCTGGTTGGC GAGGTGCGTG GCGGCGAGGC CTTCGACTTC
ATTCAAGCCC TCAATACCGG CCACGACGGC GGGATGGGCT CCCTGCACGC CAACAACGGC
CGCACTGCGC TCTCCCGCCT GGAGAGCCTC GCCATGCTCG GCATCCCGCT CGGCTCGCGA
TGGGATCTGA GCGACATGCG CAAGCTCATC GCCGACTGCT TCCACTACGT CGTGCACATG
CGGCGCACGG GCGAGATGCG GCACGTCTCC GAGATTCTGG AGATCCAGGG CTACGCAAAC
AACGACTACG TCATCAAACG TGTTTTCTAA
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| Protein sequence | MTANHDPYSN QLTPLEESAV KMFFESLKPI QPVLEEATVA EVMINHHNSV WVERKGRLER
LDLMLEPKKL EGAIRALASS VEKSAVKGTD QGIINAGHKG LRIAAVMRPT AIDGHALSIR
RHREKNLTLS DYTAMGAFSS SVARNPDDDQ IIFPPDVSDD GLAHALSTMV RQRKNVLVAG
GTSSGKTTFL NALVGEIPHE ERIISIEDTQ ELKLSVPNCV RLLSNPDKKV TTQQLVALSL
RFRPDRVLVG EVRGGEAFDF IQALNTGHDG GMGSLHANNG RTALSRLESL AMLGIPLGSR
WDLSDMRKLI ADCFHYVVHM RRTGEMRHVS EILEIQGYAN NDYVIKRVF
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