| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5183 |
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| Symbol | |
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| ID | 8007763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 81016 |
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| End bp | 82872 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822395 |
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| Product | hypothetical protein |
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| Protein accession | YP_002973655 |
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| Protein GI | 241114180 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACG TGAGCCACTT TCGCCCGATC TTCGAGGCCC GCGCGGCCGT CGGTTGGCTG
ATCGGTTTGA TCTTGCTCCC CCTGTCCGGC ATGCCCCACG CATGGGCGTT CGCGGTCATT
TGTGCTCTGT TCCTCGTGGC GCGCGCCTAC CAGGTGCGCA AGGCGCTGGC CTTTCGCATG
TCGATTTCGA CGCGTTGGCT CACCCTCATT CAGATCGACG TGCTGCTGCG CACGAGTGCC
CGCATGCGAG CCGACCTTGA CGCGATGTAC TTCGGTAACG GCTTCGAATG GACGCAGCGC
CATTGCCAGA TCGCGCACGA CATCTTGCGC ATGCCGTCCA CCGAAATTCC GGGTCTTCCG
AAGTGGCTCC CGCCGAAAGT CGCCAAGCGA ATCGAGACCG CGTTTGCGCC GCCCAACAGC
GTCCCCGACA CGGCCCCGCA GGGCAAGTCC TGGATCCACG GGATGGAACC CAACAAGATC
GAAGTGCCCC TGCACTATAA GGCGCTCGGC GGTCACACGG CCGTGAGCGG CACCACGGGT
GCCGGGAAAA CCAAGACCTA CGAGCTGATT GCGACACAGG TCATTCACAG CCCCAACAAA
GACGTCCTCA TTATTGTCGA CCCGAAGAAC GACAAGGACT TCAAGAAGCG CGTCGAGCGT
GAATGCAAGC GTGCCGGTCG CAAGTTCCTG TACTGGAAGC AGGCTGCGCC GTCCGAATCG
ATTCGGATGA ATCCGGTTGA GAATTGGTCG CAGCCGTCGG AAATCGCCAG CCGCGTCTCC
CAACTGATGG AAGAAGGCCC TTTCCGCGAC TTTGCCTTCC TCTTCATCGA CCGCGCAGTC
AAGGGTGAGC TGTACGTCGG CGACAAGCCG AACCTCCGCT CGATCCTGAA TTACGCACAG
TCCGGCATCA ATGGTCTGCT CGATCGATGC CTGCGCCGAT TCTTTCCGGA AGCGGGCATG
CTCGACTGGG AAGACGAGGC CAGAGGCTTT CTGCAGCGCA TCGCCCAGAA GGGCGGGGTG
GATCCTCTGC AGGGGATGGT TCAGCTCTAC GTCGACAACT TCGCAAAGAA GGGCCTCGGC
CACGAGACGA TCGACGGCCT GGTGGCCACC TTCGTGCACG ATCGCGAGCA CTACATGCGG
ATCATCGCCT CGGCGCTGCC GCTGCTGCAG ATGCTGGCTA CCGGCGAAAC CGGTCTCATG
CTCGCGCCGA AGGCCGACGA TTTCACGGAT GACCGTGAGA TCTGGGATAT CGAGCGCGTG
ATCAAGCAGA AGGCCGTCCT GTACGTTGGC CTGGATTCGA TGTCCAACAG CATCGTCGCC
AAGGCGATCG CTTCCATGCT GCTGGCCGAC GTGGCTTCTG TCGCGGGCGC CATCTACAAC
TTCTACGAGA CGCCACCCGA CATCGTCTTG CTGGTCGATG AGGTGGCCGA AGCCATCAAC
GAGCAGGTGA TCCAGATTCT CAACAAAGGC CGTGGCGCCG GCTTCCGGTC GTTCGTGGCG
TTCCAAAGCC GCTCCGACCT GGAAGCCAAG CTTGGCAGTG CTGCAAAGAT GCTGCAGGTG
CTCGGCAACC TGAACAACCA GATCATCCTG CGCCTTGAGG ATACCGACAC CGCGCAATGG
TTCTCCGACA AGGTGGGCGA GACAGCCATT CGCAACATCG TGGTGTCGAG CAGCGCAAGC
ACAGGTTCCG AGTCGCACGT CGGGGAATTC AGCGGCTCCG TATCTCGCTC GACGCAGTTG
GAGAAGGCGC CGCTGATTCC GCCACGCCTC ATCACCGAAC TGCCGAACCT CCAGTACTTC
ATGCGCATCT CCGGTGGCTC GGTCTACCAA GGTCGCATTC CCATCATCCA AGGATAA
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| Protein sequence | MNYVSHFRPI FEARAAVGWL IGLILLPLSG MPHAWAFAVI CALFLVARAY QVRKALAFRM
SISTRWLTLI QIDVLLRTSA RMRADLDAMY FGNGFEWTQR HCQIAHDILR MPSTEIPGLP
KWLPPKVAKR IETAFAPPNS VPDTAPQGKS WIHGMEPNKI EVPLHYKALG GHTAVSGTTG
AGKTKTYELI ATQVIHSPNK DVLIIVDPKN DKDFKKRVER ECKRAGRKFL YWKQAAPSES
IRMNPVENWS QPSEIASRVS QLMEEGPFRD FAFLFIDRAV KGELYVGDKP NLRSILNYAQ
SGINGLLDRC LRRFFPEAGM LDWEDEARGF LQRIAQKGGV DPLQGMVQLY VDNFAKKGLG
HETIDGLVAT FVHDREHYMR IIASALPLLQ MLATGETGLM LAPKADDFTD DREIWDIERV
IKQKAVLYVG LDSMSNSIVA KAIASMLLAD VASVAGAIYN FYETPPDIVL LVDEVAEAIN
EQVIQILNKG RGAGFRSFVA FQSRSDLEAK LGSAAKMLQV LGNLNNQIIL RLEDTDTAQW
FSDKVGETAI RNIVVSSSAS TGSESHVGEF SGSVSRSTQL EKAPLIPPRL ITELPNLQYF
MRISGGSVYQ GRIPIIQG
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