Gene Rpic12D_5162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5162 
Symbol 
ID8007742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp60220 
End bp61170 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content61% 
IMG OID644822374 
Producthypothetical protein 
Protein accessionYP_002973634 
Protein GI241114159 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.844585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGT CGTTTGGCCT GGTTGACCAA TTTCGCACAC TGGCGGCATT CGTTTGTGCC 
GCCACCCTCG CCTCCACACC GGCTATTGCA CAGGATGGCG TACCCGCACT CGCAATCACC
GCGCCGAACG GGGCCAAAAG CGTGCTGGTC GCCACTCTCC ACGTCCCCTA TCAGGGCATG
CGCCAGCCGG CGATGTCGGT GCTCCAGGGC GCCACAAGTT TTGTCATTGA AAGTTCGAGG
GCCCAAGGTC CACAGCCTGT CGAACTCCAG GGCGCCGATC TACTGGACCC CGAGGTGTTT
GCTGGTCGGG CCTCTCGTGC ACCATGGGCC CGGTCATTGA CCGATACACA GGTTGAATTT
CTTCAGCTGC GCGCGAAATG CGCAGCACCT CAACGTCCCG ACCTGGCCAT CGAAATGCTG
CAGCACAAGA GTCCGCGTAT GGCCGCCGCG TACGCTTGGA TTCCCTGCAC AGAATTGAGC
AACCTGTCCA GAGACGCGAT ATTCGCGATA GCGGCACTGC GCTACAACGT AGCGATAGTG
CCTCTCGAAG ATCAGACCGA CTTGGAAAAC CGGCGACGCG CGGTCCCGGA TCGGATCTAT
TGGCGCCTGC TGATGGGCGG CTTGAACATC GCCCGCCAGC GAGAGGATTT CCGTCAAGCT
GTTATCGCAT TCAATCGCGG CGACTATGAG AGGATCGCCG CTCTCGCGAG TCTGGGTAAC
GAATCTCCAG AGGATGCGGC GATCTATCAC CGCCTGATGG TCCACGACCG CAATTTGTCC
TGGATGCCGC GCTTGCGCCA AGCCCTCGAC GCCGGCGGCG CGGTGGTCGC GGTTGGTGCT
GCTCACCTGC CAGGGTCCGA CGGACTCATC GCACTCTTGC GAGCGGACGG CTACCAAGTC
AACGACATTC TGCTGCCGAA TGACACAGCA ATGGAGATGC AAGCACCATG A
 
Protein sequence
MLRSFGLVDQ FRTLAAFVCA ATLASTPAIA QDGVPALAIT APNGAKSVLV ATLHVPYQGM 
RQPAMSVLQG ATSFVIESSR AQGPQPVELQ GADLLDPEVF AGRASRAPWA RSLTDTQVEF
LQLRAKCAAP QRPDLAIEML QHKSPRMAAA YAWIPCTELS NLSRDAIFAI AALRYNVAIV
PLEDQTDLEN RRRAVPDRIY WRLLMGGLNI ARQREDFRQA VIAFNRGDYE RIAALASLGN
ESPEDAAIYH RLMVHDRNLS WMPRLRQALD AGGAVVAVGA AHLPGSDGLI ALLRADGYQV
NDILLPNDTA MEMQAP