Gene Rpic12D_5159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5159 
Symbol 
ID8007739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp56888 
End bp57988 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content59% 
IMG OID644822371 
Producthypothetical protein 
Protein accessionYP_002973631 
Protein GI241114156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.347874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCT ACATCGATGA GAGCGGGAAT ACCGGTGGCG CCACCAGTAC CGGCAAGGCA 
TACGACTTCG ACGGTCAGCC GACCTTTGCA CTTGCCGCAA TCGGCTTGCA CGATCAGGCC
GCGATCGCGG CGGTAGTCGA GGAGATCCGG TCGGCGCACC GCGTTCCGGC TGGCGAGTTG
AAGTCCAAAT CATTGACAGG CAAGCCCGAG TTTGTCCGTG ACCTGGTCGA CGCCATTTGT
GATCGAGCCC CACCGTGCTT CATCGAAGTC GTCGACAAGA GATTCTATTT GGTGATGAAC
ATGGTTAGCA GCCATGTGTT ACCACCGAGC ACGGGCATCT TGGGCAATCC GCAGGCGCAC
TTTGTCCAGA ATGCATTTGC GGATTTTCTC TATCACTTCA CGCCGGCGGA AGTGTTCGAC
GCGTTCATCG CCGCCTGCCA GGCCCCGTCC GATGCCACGC TGCGATCGTC CTTTGGCGCC
TTGCTGGACT TCCTGGATCG GTTCCCGGCG GGCGAGGTTT CAGCGGCGTG TCGCGAGATG
ACGAATCTGT CGTTCAGCGA CTACGAGGAG ATGCTCGCCG ACGAGGTTCC TACTGCTTAC
GCGCAATTCC TGCCATCGCC GGACACCGGC AAGCGCGGGA AGCCCGTTTC AATGTTGCCG
AATCTCTCGT CGCTTACGAA CATCTACGCT CGGATCAACC TGCATTACCA ACGGGACCTT
TCAACGATCG AGCTGGTGCA CGACGAGCAA CTGCAATTCG ACCAGATCCT GTCCAACAAC
AAGCAGGCGG CCGAAGCCCT CGGCGGTCAG GCGGCCAACT TCTTCACCCC GCACGCCGAC
TACAACTTCG GCGCCTCGGC GCCACTGACT TTCGCGAAGT CCCACGACTC GATTGGTCTC
CAGTTGGCAG ATGTCATTGC CGGCTTTTGC ATGAGATACA TCAAGGATTG GCTGAGCGAT
CCAAGGAATA TTTCTGGCGC TGCGCATGCC ACGTTTGCGC GCCTGTGCCG GTTGAGTGAC
AGCGGGACGG TCTGCGGGGT GAACCTCACC GCTACCAACG AACTTGCGCA CCGGGTGTTT
AGCCCAGTTT GGCGCGGCTG A
 
Protein sequence
MKFYIDESGN TGGATSTGKA YDFDGQPTFA LAAIGLHDQA AIAAVVEEIR SAHRVPAGEL 
KSKSLTGKPE FVRDLVDAIC DRAPPCFIEV VDKRFYLVMN MVSSHVLPPS TGILGNPQAH
FVQNAFADFL YHFTPAEVFD AFIAACQAPS DATLRSSFGA LLDFLDRFPA GEVSAACREM
TNLSFSDYEE MLADEVPTAY AQFLPSPDTG KRGKPVSMLP NLSSLTNIYA RINLHYQRDL
STIELVHDEQ LQFDQILSNN KQAAEALGGQ AANFFTPHAD YNFGASAPLT FAKSHDSIGL
QLADVIAGFC MRYIKDWLSD PRNISGAAHA TFARLCRLSD SGTVCGVNLT ATNELAHRVF
SPVWRG