| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5157 |
|---|
| Symbol | |
|---|
| ID | 8007737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | + |
|---|
| Start bp | 55878 |
|---|
| End bp | 56399 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644822369 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002973629 |
|---|
| Protein GI | 241114154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.47592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.450232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAC CCACGCAGAC CGCGCCCCGC CACTATGCGG TGGCCATCCG GGACACGGAG
TTGTACCTTG CCCTCCGCAT TTCGCGTTCC GCCAGTGGTG TCTATGTCAT CTTTCCGCGC
CCCCAAAATC CTATTGGCGG GACGAAACGG AACCCACACG CCAGCTATCA CCGGGACGGG
AGGCGGCATC AAAAGAGCTG GGGCATGCCT TGGTTCAAGG CGCAACGACA GCCGCTGGAC
AACCACTTCC GCGGCAGCGA GACAATTGTC GCCACTGTAC TGCAGCCCAG CCACCCGCAA
GACCCCCACT GCGACCCGAA GGATTTCTCC GCCGTCCTGG AAATCCCGCT CACTGACATC
CGTCCCAACG GCAGCACGTC GGTTTCGGTC GATCTGGCCG AGCCCGGGGT GTCGCCAACT
TCCTTGCTAC CCGGCGCCGT GATCGTACGG CAACAGGCCT ACGCCGATGG CTGGTTCCCC
TGCCTGGTGG TGACCATCTA TGACTCCCCC ACTTCTTCGT GA
|
|---|
| Protein sequence | MALPTQTAPR HYAVAIRDTE LYLALRISRS ASGVYVIFPR PQNPIGGTKR NPHASYHRDG
RRHQKSWGMP WFKAQRQPLD NHFRGSETIV ATVLQPSHPQ DPHCDPKDFS AVLEIPLTDI
RPNGSTSVSV DLAEPGVSPT SLLPGAVIVR QQAYADGWFP CLVVTIYDSP TSS
|
|---|
| |