| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5154 |
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| Symbol | |
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| ID | 8007734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 53930 |
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| End bp | 54823 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644822366 |
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| Product | integrase family protein |
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| Protein accession | YP_002973626 |
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| Protein GI | 241114151 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.557863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.471019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC TTTGGCTGAA CAATCCGGAA CGCGCTTACG CTGATTGGCA GGAGCGGGAG
GCCGAAGGCG TCGACGGCCA GCACTTCTCG GCACGCTCGC GTGCCCAGCA TCAGGCGATG
TTCGAGAAAT TCCTGCGCTA CCTTCGCGAG ACGGGCCGCG ACCTGGCCAA CTACGGAGAC
GAGCACGTAG CGGCATTTTG TGAATCGGTC GGCGCCCGAT CGGCCGCGAC AAGGATGCGG
TACCTGAAGC TGCTTGACCG CGTCGGCCGG CAACTCGTGC GCGCCGATGT CCGAGTGTCA
AATCCGGCTT CGGAGCAGTT GCGCACGGGC CATTGGCCTG ATGAGGATCA GCCCCTGTTC
CTCCCCGAAG ACAAGGACGC ACTGCTGCAG GCCTACACGC AGCCAGCGCC CGATGACGGA
TTGCGAGAAG TCCGAGGGCG CGCGGTCGTA GCGCTCTACC TGGCGACCGG CGTGACACTG
TCGGAAGGCA TTGCCACTGA GCTAGATGAC CTGCAGCTCG ATGCCACTCT GCCCTACCTG
CACATCAAAG CGAAGGCGGC GCGCGGTGCT CGAACGGTCC CCATCACACC ATTCGCAATA
CCGGCGCTGC GGACGTGGCT CACCAGACGG GCAGCAGAGG GTACCCAGGG CCAAGCCTTG
CTCACGTTGC ACACGGACGG GTCGCGGATC AATGAGGCCA GTGTCGGGCG AATCGTTAAA
TCCGCACTGA CCACAATCGA TTTCGTTGCT TCCGATATGA GCCCGCGCGT CCTGCGCAAT
ACGGTCTGCC GGCGCCTGCT CCTCGATGGA GTCGACTATG TCGAAGTGAA CCGAATCCTG
GGGCTCTCCA GCGTTCGCAC TGTCGATCGG ATTGCCGCGA CCATTGAGCG CTGA
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| Protein sequence | MDTLWLNNPE RAYADWQERE AEGVDGQHFS ARSRAQHQAM FEKFLRYLRE TGRDLANYGD
EHVAAFCESV GARSAATRMR YLKLLDRVGR QLVRADVRVS NPASEQLRTG HWPDEDQPLF
LPEDKDALLQ AYTQPAPDDG LREVRGRAVV ALYLATGVTL SEGIATELDD LQLDATLPYL
HIKAKAARGA RTVPITPFAI PALRTWLTRR AAEGTQGQAL LTLHTDGSRI NEASVGRIVK
SALTTIDFVA SDMSPRVLRN TVCRRLLLDG VDYVEVNRIL GLSSVRTVDR IAATIER
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