| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5148 |
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| Symbol | |
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| ID | 8007728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 48338 |
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| End bp | 49645 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644822360 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002973620 |
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| Protein GI | 241114145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTT CCACCAACAC ATTGCGTGAA ATACCAGGAC TTCCGACGAG GAGGTCGACT
ATTTCCACCG CAATTTATGA CTTCCACCGC AAGGCTGCCG GGCTCTTGTT GGCGTTCGCT
GCCATGCCTG GCAGTGCTGC CGAGGCGCCG CCTTACACCG CTTTGCTGCG CCAGTCCTTG
GCGCATGCTC CTATGTTGCG AGAACAGGCC GCCAACGTGG CTGCGGCAGG CGCCGACGCC
GCTCAGGCAC GTGCGTGGCT GAATCCGCGC GTGGACACGG TGTACGAAAA CCTTGGCGCG
CCGCAAAGTG GTGGCGTAAG CCAGCGCCAG AACACCTACA CGATCACCCA GCCGCTGGAA
ATCGGCGGCA AGCGTAGTGC TCGCGTCGAG GCAGGCCAAC GCGGCCTCGT GGCTGCCGAG
GCCCGCGAAC GGCAAACGCG GGTGACCTAT GCCGCTGAAC TGGCGGTGGC CTATGCCACG
GCAGAAGCCA TGCTTGGCCG CAAGGCCTTG GCAGCCGAGG ATCGCCTGCG CGCAACCGAC
GACCTGCGCG CGGCCCGGGC GCTGGTGCAA TTCGGCAAAG AGGCTGCCTT GCGTGCCGCA
CAGGCCCAAG CAAGTGTCGC GGCCGCGCAG GCTGCCGAAC AAGCGGCGAC AGCCGAGGCA
ACACAGGCCC TGGAGCACTT GGCGGTGCTG GCCGGCTCCG ACGAGCCCTA TACGACGCTC
CCCACCTCAT TGCTGGCGGC AGCTGGCCCT GCACCCGCGA ATACGACAAA GCCGGACGAG
ACGCCGGCTG TTCTCACGGC ACAAGCCGAG CGGGATGCGT TGAACGCTCA GGTGCAGGTC
GAGCGGAAGA AATGGATCCC CGATGTTGGC GTCAGTGCTG GGCTGCGGCG ATATGGCTGG
ACAAATGCCA GCGGGTACGT CGTGGGCCTG TCCGCCACGA TTCCGTTGTT CGACCGGAAC
GATGCTGCGA CCACGGCGGC AGTGGAGCGC GAGGCGGCGG CCGAGGCGCG GCTGGACAGC
GTTCGCCTGG AGGCGGCCGC TGCGCGCCGC TCGGCATTGG CACAAGCGGC CGCATCGGAG
AAGCGCTTGG CTGCTGCGGC CGAGGGCGAG CGAGCCGCCA CAGAGGCCTA TCGGCTAGGC
CGCATCGGCT ACGACGCGGG CAAGACTTCG CTGATCGAGC TGCTCGCCAC CCGGCGCGCG
CTGTTCGAGG CCAAGGGATT GACGATTGAT GCCAGCCTGG CGCGCGTGCG CGCGCTGGCG
GCACTGGCAC AGGCAGAGGG CCGCCTGGCT TTCGAGGAAA CACCATGA
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| Protein sequence | MAASTNTLRE IPGLPTRRST ISTAIYDFHR KAAGLLLAFA AMPGSAAEAP PYTALLRQSL
AHAPMLREQA ANVAAAGADA AQARAWLNPR VDTVYENLGA PQSGGVSQRQ NTYTITQPLE
IGGKRSARVE AGQRGLVAAE ARERQTRVTY AAELAVAYAT AEAMLGRKAL AAEDRLRATD
DLRAARALVQ FGKEAALRAA QAQASVAAAQ AAEQAATAEA TQALEHLAVL AGSDEPYTTL
PTSLLAAAGP APANTTKPDE TPAVLTAQAE RDALNAQVQV ERKKWIPDVG VSAGLRRYGW
TNASGYVVGL SATIPLFDRN DAATTAAVER EAAAEARLDS VRLEAAAARR SALAQAAASE
KRLAAAAEGE RAATEAYRLG RIGYDAGKTS LIELLATRRA LFEAKGLTID ASLARVRALA
ALAQAEGRLA FEETP
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