Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5145 |
Symbol | |
ID | 8007725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 43681 |
End bp | 44688 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822358 |
Product | transposase Tn3 |
Protein accession | YP_002973618 |
Protein GI | 241114143 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.904999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCG TTGAGCGCAC CGCCTATCCT CGATTTCCTC GTCTCCTAAC ACCGCAAAAG CTGCGGAAGC TGTTCACTCC GTCGAAAGAC GAGGTGGAGT GGGTCGCTGC AAGTTCGCGC GGTGAAGACC GTCGGCTGTC GCTGACGGTG CAGTTGAAGT GCTTCCAGTA CCTGCACTTC TTCCAGCCTG CAGAGAGCAT TCCGCCAGAG GTGGTCGAGC ATGTGGCCGT CTGCTTGGGC TTCGCGCCCC AGCAGCAGCT CCGGTATCCC GAGGCCAGCG GGAACGGGGC CTTGTATCGT GACCACGACA AGGTTCGCGC CTTCCTGAAG ATCCGGCCGT ACAGCGGGCC CAAGCCCCGG GCCGAGGCTG TTCGCATCGC GCGCAGAGCC AGCTCGGTCG TCAACACCGT GGTCGACGTC ATCAACGCGC TGACCACGGA ACTCGTGATC AAGGACTACG AACTGCCGAG CTTCAGCACG CTTCACAAGA TTGCTGAGAA GGAGCACGAG GCTGCCGAGC AAGCCATCTT CGACGGGGTC GAGCGCAAAC TCACCAACGA CCAGCGGCGT TGGCTGGACG AGTTGTTGAT CTCGGAGTTA TCCAACTGGC AGACCCGGTA CAACGAGCTG AAGCGGTCGG CCAAGAAGGC GTCGCGCCAG CACCTTGATG AACTGCTCGA GCAGCTTGGC TGGCTCGAAT CGCTGCCGGA CAGTGACTCG CTCCTCGAAG GCTTGACGCA GCCCAGGCTT AAGTACCTTT GCGACCTGGC CACGACTCGC GACGCCGGGG AAATGAAGGA CTTCTCGCAG GCCAAGCGCC ACACGATGAC TCTGGCGCTG ATCCGGCAGA TGCGCGTGCG CGCCCGTGAC GACATCGCGG AGATGTTCAT CCGTCGGCTG ACAGCCTGCC ACAACGCCGC CCAGGAGGAG CTGAAAGAAC TGCAGGCGCG CCAGCGCGAA CTCAGCGAGG AGCTTGTGGC CGGGGTCTCC TCGTTTTCAG TGCAATAA
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Protein sequence | MASVERTAYP RFPRLLTPQK LRKLFTPSKD EVEWVAASSR GEDRRLSLTV QLKCFQYLHF FQPAESIPPE VVEHVAVCLG FAPQQQLRYP EASGNGALYR DHDKVRAFLK IRPYSGPKPR AEAVRIARRA SSVVNTVVDV INALTTELVI KDYELPSFST LHKIAEKEHE AAEQAIFDGV ERKLTNDQRR WLDELLISEL SNWQTRYNEL KRSAKKASRQ HLDELLEQLG WLESLPDSDS LLEGLTQPRL KYLCDLATTR DAGEMKDFSQ AKRHTMTLAL IRQMRVRARD DIAEMFIRRL TACHNAAQEE LKELQARQRE LSEELVAGVS SFSVQ
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