Gene Rpic12D_5145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5145 
Symbol 
ID8007725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp43681 
End bp44688 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content62% 
IMG OID644822358 
Producttransposase Tn3 
Protein accessionYP_002973618 
Protein GI241114143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.904999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG TTGAGCGCAC CGCCTATCCT CGATTTCCTC GTCTCCTAAC ACCGCAAAAG 
CTGCGGAAGC TGTTCACTCC GTCGAAAGAC GAGGTGGAGT GGGTCGCTGC AAGTTCGCGC
GGTGAAGACC GTCGGCTGTC GCTGACGGTG CAGTTGAAGT GCTTCCAGTA CCTGCACTTC
TTCCAGCCTG CAGAGAGCAT TCCGCCAGAG GTGGTCGAGC ATGTGGCCGT CTGCTTGGGC
TTCGCGCCCC AGCAGCAGCT CCGGTATCCC GAGGCCAGCG GGAACGGGGC CTTGTATCGT
GACCACGACA AGGTTCGCGC CTTCCTGAAG ATCCGGCCGT ACAGCGGGCC CAAGCCCCGG
GCCGAGGCTG TTCGCATCGC GCGCAGAGCC AGCTCGGTCG TCAACACCGT GGTCGACGTC
ATCAACGCGC TGACCACGGA ACTCGTGATC AAGGACTACG AACTGCCGAG CTTCAGCACG
CTTCACAAGA TTGCTGAGAA GGAGCACGAG GCTGCCGAGC AAGCCATCTT CGACGGGGTC
GAGCGCAAAC TCACCAACGA CCAGCGGCGT TGGCTGGACG AGTTGTTGAT CTCGGAGTTA
TCCAACTGGC AGACCCGGTA CAACGAGCTG AAGCGGTCGG CCAAGAAGGC GTCGCGCCAG
CACCTTGATG AACTGCTCGA GCAGCTTGGC TGGCTCGAAT CGCTGCCGGA CAGTGACTCG
CTCCTCGAAG GCTTGACGCA GCCCAGGCTT AAGTACCTTT GCGACCTGGC CACGACTCGC
GACGCCGGGG AAATGAAGGA CTTCTCGCAG GCCAAGCGCC ACACGATGAC TCTGGCGCTG
ATCCGGCAGA TGCGCGTGCG CGCCCGTGAC GACATCGCGG AGATGTTCAT CCGTCGGCTG
ACAGCCTGCC ACAACGCCGC CCAGGAGGAG CTGAAAGAAC TGCAGGCGCG CCAGCGCGAA
CTCAGCGAGG AGCTTGTGGC CGGGGTCTCC TCGTTTTCAG TGCAATAA
 
Protein sequence
MASVERTAYP RFPRLLTPQK LRKLFTPSKD EVEWVAASSR GEDRRLSLTV QLKCFQYLHF 
FQPAESIPPE VVEHVAVCLG FAPQQQLRYP EASGNGALYR DHDKVRAFLK IRPYSGPKPR
AEAVRIARRA SSVVNTVVDV INALTTELVI KDYELPSFST LHKIAEKEHE AAEQAIFDGV
ERKLTNDQRR WLDELLISEL SNWQTRYNEL KRSAKKASRQ HLDELLEQLG WLESLPDSDS
LLEGLTQPRL KYLCDLATTR DAGEMKDFSQ AKRHTMTLAL IRQMRVRARD DIAEMFIRRL
TACHNAAQEE LKELQARQRE LSEELVAGVS SFSVQ