| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5141 |
|---|
| Symbol | |
|---|
| ID | 8007721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | + |
|---|
| Start bp | 41212 |
|---|
| End bp | 41757 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644822355 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002973615 |
|---|
| Protein GI | 241114140 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.114035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGC GCGCAGTACT GGCTTGGATG AGCTGCGTCA CCGGGAGCTT GCTACTGCCC
GGTTGCGCAA GCTTCCTGCG GGGCAGCTCC GTGGGACCGC AGTGCTACCG CGCGAGGAAT
GGCCCCGGGA TCAAGGCGAT ATGCACGCCG GAAGCCGTCC CTGACGAAGA AGCCGAATCG
CGAGCCAAGC GGTTCGAGCC GGTCGCCGGT CAGCTGACCA TCTATCTCGT CCGCCACCGG
TGGGGAGATG CCGCCAATAG GGTCAAGGTG GGCATTGCCG GGGAGCGGTT GGTGACGACC
ATCCCGGCTT CGCTGATTCG GATCGCCGTG CCGCCTGGAA AGCACCTCCT GGTCTTTAAC
TGGGCCAAAG GGCATGGAGT GCTACAGGTC CAGGGCGACG CCGGACAAGT GCTGTTCGTG
GATCTGGTCG GCAGCCTGTG GATCTGGAAC GAGTGGTACC GGTTGGAGAT GGGCGACCCC
TCGTTTCGAG ACAGGGCGAT GAAGAGTCGG CTCGTGGCTG ACGTCAAGCT GGGCGTGCGC
GAGTGA
|
|---|
| Protein sequence | MDRRAVLAWM SCVTGSLLLP GCASFLRGSS VGPQCYRARN GPGIKAICTP EAVPDEEAES
RAKRFEPVAG QLTIYLVRHR WGDAANRVKV GIAGERLVTT IPASLIRIAV PPGKHLLVFN
WAKGHGVLQV QGDAGQVLFV DLVGSLWIWN EWYRLEMGDP SFRDRAMKSR LVADVKLGVR
E
|
|---|
| |