Gene Rpic12D_5133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5133 
Symbol 
ID8007713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp31383 
End bp32102 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content62% 
IMG OID644822347 
Productzinc/iron permease 
Protein accessionYP_002973607 
Protein GI241114132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.426324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.124574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG TGTACTACTT CCTCACGCTT CCGGCCATCG TCATGGTGCT CGGAGGGTGG 
CTGGCGTCGT TCTGGCAGCC CAGCAAGACG CTGATCTCGA ATGTTCAGCA CGTCGCAGCC
GGCATCATCT TGGCTGCGAT CACCATCGAG GTGTTCCCAG AGATGCGTCA GTCGACAGCA
TCTCCACAAG CGCTGGTGGG CATGTTCGCC TTTGGCGTGC TGTTCATGTT CGGTGTTCAG
CGCCTGGGAT CCTGGCTGGA GGCGCGCGCA GCGAACACTG CGCCAGGCAG CAATTCCGCG
CAACTCAACT ACGGACTGGT CATCACCGTG TTCCTCGACG CGGCGCTGGA CGGCGTGACG
ATCGGTGCCG GCTTTGCGGC TGGAGAGAAG GTTGGCTTCG CGCTGGCCAT TGGCCTGTCC
GCTGAAATGC TGTTCCTGGG CATGTCCCTG GTTTCCGAGG CGATCCAAGG CCGACGTGTG
CTCTGGGTGT GCGTGGCGCT TGCCGCGACG CTCCTGACGA CTGCACTGGT CGGCTATCGG
AGCTTGAGCG CCCTGCCCGC ATCGACGGTG GCTGTCGTCC TGGCGTTTTC CGCGGCGGCG
TTGCTGTACC TCGTCACGGA GGAGTTGCTG GTAGAGGCAC ATGTGCACGA AGAGAAGCCC
TACTCGATGC TCGTGTTGTT CGCCGGCTTC GTGGGTTTCT GGGTGATCAC GCTGTTCTGA
 
Protein sequence
MGSVYYFLTL PAIVMVLGGW LASFWQPSKT LISNVQHVAA GIILAAITIE VFPEMRQSTA 
SPQALVGMFA FGVLFMFGVQ RLGSWLEARA ANTAPGSNSA QLNYGLVITV FLDAALDGVT
IGAGFAAGEK VGFALAIGLS AEMLFLGMSL VSEAIQGRRV LWVCVALAAT LLTTALVGYR
SLSALPASTV AVVLAFSAAA LLYLVTEELL VEAHVHEEKP YSMLVLFAGF VGFWVITLF