Gene Rpic12D_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5127 
Symbol 
ID8007707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp28636 
End bp29019 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content57% 
IMG OID644822341 
Producthypothetical protein 
Protein accessionYP_002973601 
Protein GI241114126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.10773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA AGCCAAGCAG CGCCTTCGTC AAGACCAGAA AAGGCTTTTG CTACCTCACG 
GTCAAGGTCG GCAGAAGCAA TTACAACATC ATGCGCATTC GCAATTACAC GCTTGAGCCG
CAGGATAAGC GCGACATGCG CCGGTTGTAT CCCGACTATC TCTTCGACTG GAAGAAGATC
GGCCAGCAGC TTGCCGAAAA GAGGGAGGTA TGCCGAGCCT ACCGCTCCAA GCGTCAAGCG
CCCCGGAGTG CCGAACGCAC ACCAGAGCCG TTCGTCATGG TGTCCTATGA CCCAAGGACG
CGCACGGTCT ACGCTTCTGA CGCTTGCGAT TCAATGGCAT TGCTTGACGC CGTTCTGCAC
ATGGAACGCG CCCGCAAGAA GTAG
 
Protein sequence
MSRKPSSAFV KTRKGFCYLT VKVGRSNYNI MRIRNYTLEP QDKRDMRRLY PDYLFDWKKI 
GQQLAEKREV CRAYRSKRQA PRSAERTPEP FVMVSYDPRT RTVYASDACD SMALLDAVLH
MERARKK