Gene Rpic12D_5117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5117 
Symbol 
ID8007903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp18603 
End bp18989 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content55% 
IMG OID644822334 
Productcopper resistance protein CopC 
Protein accessionYP_002973594 
Protein GI241114119 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.834452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0118387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC ATCATTACAT TGCAAGCATC GCTTTCACTG CATCGGCCAT GCTTGCTAGC 
GCCGCGGCGT TTGCACATCC CAAGCTGCTG TCGTCGATGC CCACCGACAA AGCGGAAGGG
GCGGCACCGG CAATGATCGA ACTCAAATTC TCGGAAAGCC TCTTTACACA ATTCTCGGGG
GCAAACCTCG TTATGACCGA GATGCCCGGC ATGTCGGAAC ACGACGCCAT GAAAATTGCC
GCGAAAGTCA CCGCTGACGA TGACCCGAAG GCGATGGTCA TCACACCTGT GCAGCCACTG
ATGACCGGGA CGTACAAAGT CGAATGGCGG GCTGTTTCGT CGGATATGCA CCCGATGTCA
GGGAACTTCT CCTTCAAGGT GAAGTAA
 
Protein sequence
MSNHHYIASI AFTASAMLAS AAAFAHPKLL SSMPTDKAEG AAPAMIELKF SESLFTQFSG 
ANLVMTEMPG MSEHDAMKIA AKVTADDDPK AMVITPVQPL MTGTYKVEWR AVSSDMHPMS
GNFSFKVK