| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5109 |
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| Symbol | |
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| ID | 8007895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 12188 |
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| End bp | 13345 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644822327 |
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| Product | Cys/Met metabolism pyridoxal-phosphate-dependent protein |
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| Protein accession | YP_002973587 |
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| Protein GI | 241114112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00360486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACCGA ATACAACACC CAACTTCATG ACCTCGTCGC CACGCTTCAG TGCGCTCACT
GTGCCGGTGC ACCGAGCTTC GACACTGGTT TTTGACACGA CGGCCCAGTT CCTTGCGCGT
AAAGGCCAGT TGTTCGACGG CTACTCATAC GGGTTGTATG GGACGCCGAC AACCCGCGCC
CTGGAGACGG AAGTTGCTTC CATCGAAGGT GGATCCCGCA CCGTGCTGGT GCCCTCCGGG
CTGGCCGCGC TGACCCATCC CATGCTTGCT CTCCTGTCTG CTGGCGACCA CGTCCTGGTG
GCCGACTGCG TGTATGGGCC GACGCGCGAG TTCTGCAACA GCGTCCTCAG GAAAATCGGT
GTTGCCGTCA CCTACTTTGC CGCCGATGCC GCGACGATCG ACGCGCACCT GCAAAGCAAC
ACGCGACTCG TGCTGCTCGA ATCGCCCGGC TCATTCACGA TGGAGATCCA GGAGATCGCC
GCCATCTCCC GCGAGGCTCA CACTGCCGGC GCGCTGGTCA TGCTGGACAA CGCATGGGGC
TTCGGCAACT CCGCCATGTT CGAGCATGGC GTGGACATCG TCTGCACCGC ATTGTCGAAG
TACGCGGCGG GCCACTCGGA TGTCTGTTTG GGTTCCATTA CCGTGCGTAG CGAACGCTTG
TTCCGCCAGA TCAAGACGTT TGTATCGGGT GTTGGCACCG GGGTTTCGTC GGATGACGCA
TTCCTCGTGC TGCGCGGCCT GCGCACCCTT TCCGTTCGCT TGGCCGAACA CGCGCAACGA
GGGCTGGACC TGACGCAGTG GCTGCGTGGC CGCCGCGAGG TCGCCTCGCT GGTCCATCCC
GCTCACCCGG AAGATCCACA GCATCAACGC TTCAAGCGGT ACTTCAGCTC CGGCAACGGC
TTGCTGACCA TTCTCTTGCA CAGCCAGGAT CTTGAACGCA TCAGCGCCAT GCTCGATGGC
TTAAAGCATT TTCGGATCGG TGCCAGTTGG GGCGGCACGG ACAGCCTGAT TGCCATTGCA
GACCTCACCG CCTCTCGCAT CGTGCAGCCA TGGCCTCCAG GACGCTATGC GCTGCGACTG
CATATCGGGC TTGAACCGTT GGAACCCCTG TATGCAGACC TAGAGGCCGG GTTTACCAGG
TTGAATGGGC AAGCGTAG
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| Protein sequence | MPPNTTPNFM TSSPRFSALT VPVHRASTLV FDTTAQFLAR KGQLFDGYSY GLYGTPTTRA
LETEVASIEG GSRTVLVPSG LAALTHPMLA LLSAGDHVLV ADCVYGPTRE FCNSVLRKIG
VAVTYFAADA ATIDAHLQSN TRLVLLESPG SFTMEIQEIA AISREAHTAG ALVMLDNAWG
FGNSAMFEHG VDIVCTALSK YAAGHSDVCL GSITVRSERL FRQIKTFVSG VGTGVSSDDA
FLVLRGLRTL SVRLAEHAQR GLDLTQWLRG RREVASLVHP AHPEDPQHQR FKRYFSSGNG
LLTILLHSQD LERISAMLDG LKHFRIGASW GGTDSLIAIA DLTASRIVQP WPPGRYALRL
HIGLEPLEPL YADLEAGFTR LNGQA
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