Gene Rpic12D_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5107 
Symbol 
ID8007893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp10740 
End bp11147 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content59% 
IMG OID644822325 
Producthypothetical protein 
Protein accessionYP_002973585 
Protein GI241114110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00244392 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAATCA GATATCCCGT GATTACTGAA GGCGGGTACG TTTTGCGGGC GTGCAGCGCG 
CTGGCACTGG CGGCGATGGT CAGTGGCTGC ACAACTGCTT ACGAAGGCAA ATATGAGTAC
GCCGAAGGCT GGCGGCTAGG CGTGATCGTA AGAACCGGCA CGCTCGCCGA CATGGCCCCT
GTGGAGGCAA TGTGCTCGCT TGCAGACCAG AGCAGCACGG CACGCTTTGC CTATGTGCAG
TTCATCTTTG GGCCGACCCA CGGCAAGTTT CTTTACAGCG GACCACACCA ACGCCATGTC
ATCGTGCCGC TGCCGCAAGG GGGTGGGCTG CACGAAGGCG CGCGCGTCTA CATAAATCTC
CAGGATTGCA ACCAAGCGGC TGTTCCCGCA TCCGCAACTA CTCCATAG
 
Protein sequence
MSIRYPVITE GGYVLRACSA LALAAMVSGC TTAYEGKYEY AEGWRLGVIV RTGTLADMAP 
VEAMCSLADQ SSTARFAYVQ FIFGPTHGKF LYSGPHQRHV IVPLPQGGGL HEGARVYINL
QDCNQAAVPA SATTP