Gene Rpic12D_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5105 
Symbol 
ID8007891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp7854 
End bp9119 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content58% 
IMG OID644822323 
Producthypothetical protein 
Protein accessionYP_002973583 
Protein GI241114108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00753919 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGATT TAACAAGAAC GCTCATTGAG CGATGGAAGC CTGACAGAGA CGGAACTTTC 
CAGACGTGGT TTCTCTGGCC CGAGCGCCTC AAGAATTTCC GCTCCATCCG GCGTGGCATT
AGTACGGTGG TCAACGAGAT CCAGGCTGGG ACATTTGGCA ACGCCTATCG CGGATCCTCT
CTCGAAACCG TGGTCTCCGC GATTGCCGAG CAGCGCCAAA TCTTCAAGGG GGCGGACCAC
GCATTCCTCT GGAAACCCAA GTTGCGTATT CCGGACATCT ACGAGAACGC AGATCATCAG
CGAGCGTTCG CCAGACTGCT GCATACGTGC AATTGCTGCG ATACCGAGCA AGAGGTAGTT
CAAGCGATTC AGCAGTTGAA CCGGCACGGC ATCAAGGGGC TGGGCCCAGC CGTTGCCAAC
CTGCTGTATT TCATCCACCC AACTTTGGCG GTTCCCTTCA ACACTGCGAT CGTCAATGGA
TACAACGCGC TGACGGGCTC TCGTGTCAAG CTCGGCAAAT GGGACCACTA CTTGGCCATG
CGCGAGGGCG TGCTGTCCCT GAATGGACGC TACCGCGACC TGCTGTCCAA TGACCTGGGT
GCGATTGCCG GACTGCTGTT CGATATCGGA ATGGAGCGCT ATCCAGCTCC GCCGCAAGAG
GGTGGCGCTA CCACGATTGC TGAGTGGGAG AAGGATCTGG CTAAGGCCCG CGAGGAAGCA
GCCTCCTTCG CCAAGCAACT TCAAGCAGGC CGAACCGACG ATGCCTCTCA TACAGAGGTG
CAAGGCTGGT TGCGCGATCT TGGCAAGGCA TTGGGCTTCG CGGTCTGGGT GGCGACCAAC
GACCGCAGCC GCCCCTACAA TGGCGGCGTG CTCAGCGAGG GCTGCCTGGC AACATTGCCG
AATTCACTTT TGGTTTCAGG CGCTGACACC GTGCCTCTCA TCGATGTCGT CTGGCTGAAC
GCTGTCTCGC TGGAAGTGGA AGCTGCCTTC GAGGTCGAAC ACACCACATC CATCTACTCG
GGCATCGTAC GACTGCTAGA TCTGGCTTTG GGCACAGATC AAGCGACAAG GAAACACCTA
TTCCTGGTGG CTCCAGATGC CAGAGAGGCG GACGTGCGCG CCCAACTCGC ACGTCCCGCT
TTCCGCAGGG TTGCAGAACT AGGCATTCGC TATGTTCCCT ATACCAGTCT CACCGAACAC
CGAGATAGCA TTGCGCGTTT TGGCGTGGGG ATCAAGCCGA TCGAAGCTAT CGCTCGAACG
CTGTAG
 
Protein sequence
MTDLTRTLIE RWKPDRDGTF QTWFLWPERL KNFRSIRRGI STVVNEIQAG TFGNAYRGSS 
LETVVSAIAE QRQIFKGADH AFLWKPKLRI PDIYENADHQ RAFARLLHTC NCCDTEQEVV
QAIQQLNRHG IKGLGPAVAN LLYFIHPTLA VPFNTAIVNG YNALTGSRVK LGKWDHYLAM
REGVLSLNGR YRDLLSNDLG AIAGLLFDIG MERYPAPPQE GGATTIAEWE KDLAKAREEA
ASFAKQLQAG RTDDASHTEV QGWLRDLGKA LGFAVWVATN DRSRPYNGGV LSEGCLATLP
NSLLVSGADT VPLIDVVWLN AVSLEVEAAF EVEHTTSIYS GIVRLLDLAL GTDQATRKHL
FLVAPDAREA DVRAQLARPA FRRVAELGIR YVPYTSLTEH RDSIARFGVG IKPIEAIART
L