Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5104 |
Symbol | |
ID | 8007890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 7026 |
End bp | 7463 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644822322 |
Product | protein of unknown function DUF411 |
Protein accession | YP_002973582 |
Protein GI | 241114107 |
COG category | [R] General function prediction only |
COG ID | [COG3019] Predicted metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0385442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGGCC TGGCTCTCTT GCCTGCCATA GCTTTGGCGC AGAAGTCTGA GCCAAAGCCT ACATTCCAAG TTTGGAAGAC GCCGGGTTGT GGATGCTGCA AGGATTGGTT GTCCCACCTG CGGGACAACG GATTCGATGT AGTCACACAC GACGTCGAAG ACACCGTCGA GGCTCGACGC AAGACAGGCA TTCCCGATCG CTACGCCTCG TGCCATACGG CAGCCGTGCA GGGCTATGCC GTGGAAGGCC ATGTGCCTGC GCGCGAGATC AAGCGCCTAT TGCGGGAACG CCCTAAGGCA ATCGGGCTGG CGGTCCCCAG CATGCCCATC GGTGCGCCTG GCATGGACGG TCCGGCGTAC GGTAATCGAC GTATGCCGTA CAACGTATTA CTGATCGGTT TGGATGGGAC ATCCACTGTG TTCCAAGCGT ACAGCTGA
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Protein sequence | MVGLALLPAI ALAQKSEPKP TFQVWKTPGC GCCKDWLSHL RDNGFDVVTH DVEDTVEARR KTGIPDRYAS CHTAAVQGYA VEGHVPAREI KRLLRERPKA IGLAVPSMPI GAPGMDGPAY GNRRMPYNVL LIGLDGTSTV FQAYS
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