Gene Rpic12D_5104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5104 
Symbol 
ID8007890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp7026 
End bp7463 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content59% 
IMG OID644822322 
Productprotein of unknown function DUF411 
Protein accessionYP_002973582 
Protein GI241114107 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0385442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCC TGGCTCTCTT GCCTGCCATA GCTTTGGCGC AGAAGTCTGA GCCAAAGCCT 
ACATTCCAAG TTTGGAAGAC GCCGGGTTGT GGATGCTGCA AGGATTGGTT GTCCCACCTG
CGGGACAACG GATTCGATGT AGTCACACAC GACGTCGAAG ACACCGTCGA GGCTCGACGC
AAGACAGGCA TTCCCGATCG CTACGCCTCG TGCCATACGG CAGCCGTGCA GGGCTATGCC
GTGGAAGGCC ATGTGCCTGC GCGCGAGATC AAGCGCCTAT TGCGGGAACG CCCTAAGGCA
ATCGGGCTGG CGGTCCCCAG CATGCCCATC GGTGCGCCTG GCATGGACGG TCCGGCGTAC
GGTAATCGAC GTATGCCGTA CAACGTATTA CTGATCGGTT TGGATGGGAC ATCCACTGTG
TTCCAAGCGT ACAGCTGA
 
Protein sequence
MVGLALLPAI ALAQKSEPKP TFQVWKTPGC GCCKDWLSHL RDNGFDVVTH DVEDTVEARR 
KTGIPDRYAS CHTAAVQGYA VEGHVPAREI KRLLRERPKA IGLAVPSMPI GAPGMDGPAY
GNRRMPYNVL LIGLDGTSTV FQAYS