Gene Rpic12D_5102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5102 
Symbol 
ID8007888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp5621 
End bp6007 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content58% 
IMG OID644822320 
Productcopper resistance protein CopC 
Protein accessionYP_002973580 
Protein GI241114105 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0403069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCC CTCGTTACAT CGCAAGCATC GCTGTCGCGG CATCGGCCAT TTTCGCCAGC 
ACGGCCGCAT TCGCGCATCC TAAGCTGCTG TCTTCGACGC CTGCTGACAA AGCGGAAGTC
GCCGCGCCGG CAAAGATCGA GCTTAAGTTC TCGGAAAATC TCTCGACGCA ATTCTCGGGG
GCTAATCTCG TTATGACGGA GATGCCTGGC ATGTCCAGTC ACGACGCCAT GAAAGTCGCC
GCGAAGGTCG CCGCCGACGA TGACCCCAAG ACGATGGTCA TCACGCCCGC ACAGCCGCTG
ATGACGGGAA CCTACAAGGT CGAATGGCGT GCTGTCTCGT CGGATACGCA CCCGATGACG
GGAAACTTCT CGTTCAAGGT GAAGTAA
 
Protein sequence
MLTPRYIASI AVAASAIFAS TAAFAHPKLL SSTPADKAEV AAPAKIELKF SENLSTQFSG 
ANLVMTEMPG MSSHDAMKVA AKVAADDDPK TMVITPAQPL MTGTYKVEWR AVSSDTHPMT
GNFSFKVK