Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5098 |
Symbol | |
ID | 8007882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | - |
Start bp | 135 |
End bp | 1505 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644822316 |
Product | heavy metal sensor signal transduction histidine kinase |
Protein accession | YP_002973576 |
Protein GI | 241114101 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0940065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGCC TTTCATTGAC GGCGCGGCTA ACCGCATATT TCTCCTTGTC GTCAGCGGCC GTGTTGTTGG GCCTCGGCAT TCTGATTGCC CTGGCGATGG AGGAACACTT TGCCGTGGAA GACTTTACGG CGTTGGGCGA GAACGTGAAC GTCATTCGCC GGGTGGTTGA GAGTAGTTCT GCGGCCGAGG TCTCCACTCG ACTCAACGAC GTGTTGCAGC ATCGCACGGA TCTGATTGTG CGGGTCCAGG CGCCACAGGG TCAGCCCCTT TTTGCTACCC CCAACTTTGA CTTTGCGGAG GTGTTGCGCG TGCTGCGCAA GGCAGGCCGC CATTCCGGGG CCCTTGTTTG GCAGCAGGGC GAAGAGCAAT ACCGGGGTGT GCATATGCAA GTGCCACTGC GCGACGGCGA TGCGCTCGAC GTGTTGGTGG GCATCAATAC GGAGATCCAT GCGCATTTCC TACGAGCGTT TCGGAAGACG TTGATGCTCT ACATCGCGTT GGCCGCCTTG GCGAGCGGCC TATTCGGATG GTGGGCGGCC CGGCGCGGGC TGTTGCCATT GCGCGCAATG GCTTCGCGAG CGAAGTCTGT AACTGCCGAC CGCCTGAACG AACGGATGCC GGTTGATATG GTACCTGTCG AGGTTGCCGA TCTTGGCGTG ACGTTGAACG GCATGCTCGC GCGCCTGCAG GGCGATTTCC AGCGACTCAC CGACTTCTCG ACCGATATCG CACACGAGCT ACGCACACCG ATCACCAACC TGTTGACGCA AACCGAGGTG GCACTCTCAC AGACTCGCGA GCCTGCGAAA TACAGAGACG TCCTTGCTTC AAACGTGGAA GAGCTGCAGC GGCTGGCTCG GATGGTGTCG GACATGCTTT ATCTAGCCAA GATGGAGCAC AACCTGACGC TGCCTAGTGC CGAGATGATC GAGCTTGCCG ACGAGGTGCG TGCCCTCTTT GAGTTCTACG ATGCGTTTGC AGAGGACAAA GCCGTGCAGT TGCAAGTGGA AGGACAAGCG CAGGTGCGCG GCGATCGGCT CATGCTCAGA CGCGCCTTCA GCAATCTGTT GTCGAATGCA ATACGGCACA CGCCCAGGTG CGGCCGTGTG ATCGTTTCCA TCAAGCCAGG CGAGGAGGAT CTCGCCGTGA CGATCGACAA CGACGGCGAA GCGATTGCTC CTGACGTGCT GCCGTTCATC TTCGAGCGCT TCTTTCGTGC AGACAAGTCA CGCGCGCGTC CCGAATCTGA CGGAGCAGGC CTTGGCTTGG CCATCACCAA AGCAATCGTT CTCGCCCATG GGGGAATCAT TTCTGTTACA CGCGCGCACG ACCGTACTCG ATTTACCGTC CGGCTGCCGA TCCGCTCCTG A
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Protein sequence | MRRLSLTARL TAYFSLSSAA VLLGLGILIA LAMEEHFAVE DFTALGENVN VIRRVVESSS AAEVSTRLND VLQHRTDLIV RVQAPQGQPL FATPNFDFAE VLRVLRKAGR HSGALVWQQG EEQYRGVHMQ VPLRDGDALD VLVGINTEIH AHFLRAFRKT LMLYIALAAL ASGLFGWWAA RRGLLPLRAM ASRAKSVTAD RLNERMPVDM VPVEVADLGV TLNGMLARLQ GDFQRLTDFS TDIAHELRTP ITNLLTQTEV ALSQTREPAK YRDVLASNVE ELQRLARMVS DMLYLAKMEH NLTLPSAEMI ELADEVRALF EFYDAFAEDK AVQLQVEGQA QVRGDRLMLR RAFSNLLSNA IRHTPRCGRV IVSIKPGEED LAVTIDNDGE AIAPDVLPFI FERFFRADKS RARPESDGAG LGLAITKAIV LAHGGIISVT RAHDRTRFTV RLPIRS
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