Gene Rleg_5408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5408 
Symbol 
ID8007366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp824782 
End bp825672 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID644822312 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002973572 
Protein GI241113737 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGA AACTGATCGC TTCCGCCGCC CTGCTGGGTC TAATGATGAC AACTTCGGTC 
TTCGCTGAGG AGGCGGTCGT GCCAAAGCAG ACCGTCAACG ACGCGCTTCG CGCCCGCCTG
CCGGAAAAGA TCCGCACGGA CGGCAAGATG ATCTCCGTCA ACAACGGTTC CTTTCCGCCC
TATGAGATCG TCACCGGCAC GAAACTCACC GGCGCCAGCG CCGACCTGAC CGATGCGATC
GGCCAGATGC TCGGCGTCGA GATCGAGCAC GAAACCGTCA GTGGACTGAC CGCATTGCTC
GCCGGCATCA ATTCCGGCCG ATACCAGTTC GCCTTCGGCC CGATCGGTGA CTTCAAGACC
CGTGAAGAGG CCAATGATTT CGTCGATTGG GTTCAGGAAT ACGTGGTCTT CTCCGTTCAA
AAGGGCAATC CGAAGGCCAT CGGTTCGCTC GACAGCGCCT GCGGCAATCG CATTGCTGTC
ATGGCCGGCG GCTCCGCCGA AAAGGTGATC CAGGCCCAGG TCGAAAAGTG CAAGACGGAC
GGCAAGGCTG CACTCGAAGT GCAGTCCTAT ACCGACCAGC CGAGCTCGAT CCTGGCGGTC
CGCTCCAAAC GCGCCGACGC CTTTTTCTCC TCGCAGGCCC CGCTGACCTA TTTCGTGTCT
CAGGCAAACG GCCAGCTGGA ACTGAGCGGC GTCGGCCAGA AGAATGGCTT CGACGATCTG
TATCAGGGCG CCGTCGTGCC GAAGGGCTCG CCAATCGGCC CCGTTCTGCT CGACTCGATC
AAGGCGTTGA TGGATAACGG CGCCTATGCC GCCATCATGA AGAAGTGGGG TCTTGAGAAC
AACATGATCA AGCAGCCCGG TCTCAATCTT GGTGGAGCCC TGCCGAAATG A
 
Protein sequence
MHSKLIASAA LLGLMMTTSV FAEEAVVPKQ TVNDALRARL PEKIRTDGKM ISVNNGSFPP 
YEIVTGTKLT GASADLTDAI GQMLGVEIEH ETVSGLTALL AGINSGRYQF AFGPIGDFKT
REEANDFVDW VQEYVVFSVQ KGNPKAIGSL DSACGNRIAV MAGGSAEKVI QAQVEKCKTD
GKAALEVQSY TDQPSSILAV RSKRADAFFS SQAPLTYFVS QANGQLELSG VGQKNGFDDL
YQGAVVPKGS PIGPVLLDSI KALMDNGAYA AIMKKWGLEN NMIKQPGLNL GGALPK