Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5399 |
Symbol | |
ID | 8007357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 815062 |
End bp | 815982 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644822303 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002973563 |
Protein GI | 241113728 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.539656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTCA CCTACTTCCT GAAACGTGCG GCCTTTGCGG CACTCGCCCT TGCAGCATTG ATGACATCCG CCTTCTTCCT CGTGCGGTTG ACGGGCGATC CCGTCAATCT CTACCTGCCC GTCGATGCCT CGGATGCCGC CCGCGAAGCC ATGCGCGTCC GTCTCGGCCT CGATCGTTCC CTCCCGTGGC AATTCCTCGA TTGGGCCGGG GATATGCTGA GCCTCGATTT CGGCACGTCG CTTTGGCACA ACCGCCCGGC CATGGACGTT GTCCTGGAGG CGCTGCCGAA CACGCTGGCG CTCGGTGCCA TTGCCTTGAC CCTGGCCTTC ATCGCCGCCG TCATCATCGG ATCGATTGCC GCTGTCAATG CCGGCGGTTG GATCGACCGG GCCATCAACG TGCTGTCGCA GGCAGCGGCC AGCGTGCCGG ATTTCTGGCT CGGGCTGATG GGCGTCCTGC TATCTGCCGT CACCTTGCGC ATTCTGCCGA CATCGGGTTT CGGCGGTCCG ATCTATTGGA TCCTGCCGGT TGCCTGTCTT TTTGCCAGAC CGTTCGGGAC GCTGGTGCAG ATCGTCCGCG GCTCGATGAT CGAAGCACTG AACGCGACAT TTGTCCGGAC TGCGCGGGCC AAGGGCGCGC GCGGCGGCCG GGTTACCTTC GTGCATGCGC TGCGCAATGC CCTCCTGCCC GCGGTGACCG TGACCGGTGA CCTCGCCGCC CAGTTCGCCG GCGGCGGTGG CGTCGTCGAG GTTGTTTTCG GGTTTCCCGG CATCGGTAAG CTGCTGATCG ACGGCATCCT GAAGCGCGAT TTCGCGATCG TCCAGGCATC GATCTTCGCG GTTGCCGTCG TTATCTTCGT CATCAATATC CTGGTCGATA TGCTCTATGC ATCGATCGAT CCGCGTGTGA GGGTCGAATG A
|
Protein sequence | MSFTYFLKRA AFAALALAAL MTSAFFLVRL TGDPVNLYLP VDASDAAREA MRVRLGLDRS LPWQFLDWAG DMLSLDFGTS LWHNRPAMDV VLEALPNTLA LGAIALTLAF IAAVIIGSIA AVNAGGWIDR AINVLSQAAA SVPDFWLGLM GVLLSAVTLR ILPTSGFGGP IYWILPVACL FARPFGTLVQ IVRGSMIEAL NATFVRTARA KGARGGRVTF VHALRNALLP AVTVTGDLAA QFAGGGGVVE VVFGFPGIGK LLIDGILKRD FAIVQASIFA VAVVIFVINI LVDMLYASID PRVRVE
|
| |