Gene Rleg_5399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5399 
Symbol 
ID8007357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp815062 
End bp815982 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content63% 
IMG OID644822303 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973563 
Protein GI241113728 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.539656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA CCTACTTCCT GAAACGTGCG GCCTTTGCGG CACTCGCCCT TGCAGCATTG 
ATGACATCCG CCTTCTTCCT CGTGCGGTTG ACGGGCGATC CCGTCAATCT CTACCTGCCC
GTCGATGCCT CGGATGCCGC CCGCGAAGCC ATGCGCGTCC GTCTCGGCCT CGATCGTTCC
CTCCCGTGGC AATTCCTCGA TTGGGCCGGG GATATGCTGA GCCTCGATTT CGGCACGTCG
CTTTGGCACA ACCGCCCGGC CATGGACGTT GTCCTGGAGG CGCTGCCGAA CACGCTGGCG
CTCGGTGCCA TTGCCTTGAC CCTGGCCTTC ATCGCCGCCG TCATCATCGG ATCGATTGCC
GCTGTCAATG CCGGCGGTTG GATCGACCGG GCCATCAACG TGCTGTCGCA GGCAGCGGCC
AGCGTGCCGG ATTTCTGGCT CGGGCTGATG GGCGTCCTGC TATCTGCCGT CACCTTGCGC
ATTCTGCCGA CATCGGGTTT CGGCGGTCCG ATCTATTGGA TCCTGCCGGT TGCCTGTCTT
TTTGCCAGAC CGTTCGGGAC GCTGGTGCAG ATCGTCCGCG GCTCGATGAT CGAAGCACTG
AACGCGACAT TTGTCCGGAC TGCGCGGGCC AAGGGCGCGC GCGGCGGCCG GGTTACCTTC
GTGCATGCGC TGCGCAATGC CCTCCTGCCC GCGGTGACCG TGACCGGTGA CCTCGCCGCC
CAGTTCGCCG GCGGCGGTGG CGTCGTCGAG GTTGTTTTCG GGTTTCCCGG CATCGGTAAG
CTGCTGATCG ACGGCATCCT GAAGCGCGAT TTCGCGATCG TCCAGGCATC GATCTTCGCG
GTTGCCGTCG TTATCTTCGT CATCAATATC CTGGTCGATA TGCTCTATGC ATCGATCGAT
CCGCGTGTGA GGGTCGAATG A
 
Protein sequence
MSFTYFLKRA AFAALALAAL MTSAFFLVRL TGDPVNLYLP VDASDAAREA MRVRLGLDRS 
LPWQFLDWAG DMLSLDFGTS LWHNRPAMDV VLEALPNTLA LGAIALTLAF IAAVIIGSIA
AVNAGGWIDR AINVLSQAAA SVPDFWLGLM GVLLSAVTLR ILPTSGFGGP IYWILPVACL
FARPFGTLVQ IVRGSMIEAL NATFVRTARA KGARGGRVTF VHALRNALLP AVTVTGDLAA
QFAGGGGVVE VVFGFPGIGK LLIDGILKRD FAIVQASIFA VAVVIFVINI LVDMLYASID
PRVRVE