| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5398 |
|---|
| Symbol | |
|---|
| ID | 8007356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 813501 |
|---|
| End bp | 815021 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822302 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002973562 |
|---|
| Protein GI | 241113727 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TGAAGGCAAT TGGTGCGCTG AGCATCGGAC TGGCATTTCT GCTGGGTCCG
GGCAGCGCAA TTCGCGCCGA CGCTGCCTCG GACAAGCTGA CGGTCGTGGT GACCGACGAA
CCGAAGTCGC TCGATCCCTG TGACACCGAC CTTTCGGGCA ATTCTCGCAT TCTGCACAAC
AACATCACCG AAGCGCTGGT CAATCTGAGC CCGGCCGACG GATCGGTCGT CCCGAGCCTT
GCCGCCAGCT GGCGGCAAGT GGACGAGCTG ACCTGGGAAT TCAAGCTCCG CGACGACGTC
ACCTTCCACG ACGGCAAGGC GTTTGATGCC AGTGCAGTCG TTGCCGCTCT CAAGCGGGCG
CAGGATCCGG CACTGGCCTG CGAAGTCGGA CTTGCGACGC TGAAGGGCGT CAAGTTCAAT
GCAGAAGCGG TGAACCCCAC CACCCTCCTC ATCAAAACGG ATATCGTCGA GCCGATCCTG
CCGAACAAGA TGTCCGCCGT GGACATCGGT TCGCCGGCGA CCCCGAACGA CGGCAAGTCG
CGCTCCCCGG CCGGAACCGG ACCTTACAAG CTTGCAGCGT GGACGCCCGG GCAATCGGTC
GACCTCGTGG CCTATGACGG CTATTGGGGC GACAAGCCGG CGATCAAGAA CGCGACCATC
ATCTGGCGCG CCGAATCCGC TGTTCGCGCG GCAATGGTCG CCACCGGTGA GGCGCAGATC
GCCTATGAAA TAGCGCCCCA GGACGGCACG TCGGAACAGG ATCATGCCTT CCCGAACGCC
GAAACCTCGC TGCTGAGGAT CGACGCAGAA ATTGCGCCAC TCAACGACAA ACGCGTGCGC
GAAGCCCTTA ATCTTGCGAT CGACCGGGAC GGACTTGTCG GCACCATCTT CCACCAGGAT
GCCCAAAAGG CGATGCAGGC GGTGCCGCCG TCCGTCTTCG GCTTCAATCC CGACATCCCC
GTCTGGACGT ATGATCCCGA AAAAGCGAAG TCCCTGCTCG CCGCGGCGAA AGCCGATGGC
GTGCCGGTTG ACAAGGAAAT CGTCATCTAC GGCCGCATCG GCATCTATCC CAATTCGTCC
GAAAGCCTGG AAGCCATTCA GGCGATGCTC GCGGATGCAG GTTTCAATGC CCGGCTCGAA
ATGCTTGAAA CAAGCCCGTG GCTGAAGAAG CTTCTTAAGC CCTGGGACAA GGAACGTCAG
CCGTCGATCC TGCAGACGCA GATCGACAAC ACCGAAGGCG ACGCCGTATT CACGCTGCCG
AACCGTTTTA CTACCGACGG CAACCAGTCG ACCATCGCCG ATGCCAAACT CGACACATTG
ATTACCGACG CGTCGAAGGC AACCGGCGAC GAACGCAGGA AACTGTTCGA GGAGGCCTTC
AGCTACATCG CCGTCGATGC GGTCAATATC GTGCCGCTGT TCCACATGGT CACGATTGCC
CGCGTCGCCG AGAACGTCAC CTACACGCCC GATGTGCAGG CCGGCAACGA GATCAAGCTT
AAATCGATCA GCTACCGCTG A
|
|---|
| Protein sequence | MKKMKAIGAL SIGLAFLLGP GSAIRADAAS DKLTVVVTDE PKSLDPCDTD LSGNSRILHN
NITEALVNLS PADGSVVPSL AASWRQVDEL TWEFKLRDDV TFHDGKAFDA SAVVAALKRA
QDPALACEVG LATLKGVKFN AEAVNPTTLL IKTDIVEPIL PNKMSAVDIG SPATPNDGKS
RSPAGTGPYK LAAWTPGQSV DLVAYDGYWG DKPAIKNATI IWRAESAVRA AMVATGEAQI
AYEIAPQDGT SEQDHAFPNA ETSLLRIDAE IAPLNDKRVR EALNLAIDRD GLVGTIFHQD
AQKAMQAVPP SVFGFNPDIP VWTYDPEKAK SLLAAAKADG VPVDKEIVIY GRIGIYPNSS
ESLEAIQAML ADAGFNARLE MLETSPWLKK LLKPWDKERQ PSILQTQIDN TEGDAVFTLP
NRFTTDGNQS TIADAKLDTL ITDASKATGD ERRKLFEEAF SYIAVDAVNI VPLFHMVTIA
RVAENVTYTP DVQAGNEIKL KSISYR
|
|---|
| |